source: main/trunk/greenstone2/perllib/IncrementalBuildUtils.pm@ 21562

Last change on this file since 21562 was 21562, checked in by mdewsnip, 11 years ago

Changed calls to GDBMUtils::gdbmCachedCollectionSet() to dbutil::write_infodb_entry(). Part of removing GDBMUtils.pm and making the code less GDBM-specific.

  • Property svn:executable set to *
  • Property svn:keywords set to Author Date Id Revision
File size: 21.1 KB
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1###########################################################################
2#
3# IncrementalBuildUtils.pm -- API to assist incremental building
4#
5# A component of the Greenstone digital library software
6# from the New Zealand Digital Library Project at the
7# University of Waikato, New Zealand.
8#
9# Copyright (C) 2006 DL Consulting Ltd and New Zealand Digital Library Project
10#
11# This program is free software; you can redistribute it and/or modify
12# it under the terms of the GNU General Public License as published by
13# the Free Software Foundation; either version 2 of the License, or
14# (at your option) any later version.
15#
16# This program is distributed in the hope that it will be useful,
17# but WITHOUT ANY WARRANTY; without even the implied warranty of
18# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
19# GNU General Public License for more details.
20#
21# You should have received a copy of the GNU General Public License
22# along with this program; if not, write to the Free Software
23# Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA.
24#
25# /** Initial versions of these functions by John Thompson, revisions by
26# * and turning it into a package by John Rowe. Used heavily by
27# * basebuilder::remove_document() and getdocument.pl
28# *
29# * @version 1.0 Initial version by John Thompson
30# * @version 1.1 Addition of get_document and change of get_document_as_xml
31# * by John Rowe
32# * @version 2.0 Package version including seperation from calling code and
33# * modularisation by creating gdbmget, gdbmset and
34# * get_database_path by John Rowe
35# *
36# * @author John Thompson, DL Consulting Ltd.
37# * @author John Rowe, DL Consulting Ltd.
38# */
39###########################################################################
40package IncrementalBuildUtils;
41
42BEGIN {
43 die "GSDLHOME not set\n" unless defined $ENV{'GSDLHOME'};
44 die "GSDLOS not set\n" unless defined $ENV{'GSDLOS'};
45 unshift (@INC, "$ENV{'GSDLHOME'}/perllib");
46 unshift (@INC, "$ENV{'GSDLHOME'}/perllib/cpan");
47 unshift (@INC, "$ENV{'GSDLHOME'}/perllib/plugins");
48 unshift (@INC, "$ENV{'GSDLHOME'}/perllib/classify");
49}
50
51use doc;
52use cfgread;
53use colcfg;
54use strict;
55use util;
56
57use ClassifyTreeModel;
58use IncrementalDocument;
59
60# Change debugging to 1 if you want verbose debugging output
61my $debug = 1;
62
63# Ensure the collection specific binaries are on the search path
64my $path_separator = ":";
65if($ENV{'GSDLOS'} =~ /win/) {
66 $path_separator = ";";
67}
68$ENV{'PATH'} = &util::filename_cat($ENV{'GSDLHOME'}, "bin", $ENV{'GSDLOS'}) . $path_separator . &util::filename_cat($ENV{'GSDLHOME'}, "bin", "script") . $path_separator.$ENV{'PATH'};
69
70# /**
71# */
72sub addDocument()
73 {
74 my ($collection, $doc_obj, $section, $updateindex) = @_;
75
76 $updateindex = 0 unless defined($updateindex);
77
78 print STDERR "IncrementalBuildUtils::addDocument('$collection',$doc_obj,'$section')\n" unless !$debug;
79 # Gonna need to know in several places whether this is the top section
80 # of the document or not
81 my $is_top = ($section eq $doc_obj->get_top_section());
82
83 # Retrieve all of the metadata from this document object only - not any
84 # child documents
85 my $metadata = $doc_obj->get_all_metadata($section);
86 # Check and add the docnum first
87 my $found_docnum = 0;
88 foreach my $pair (@$metadata)
89 {
90 my ($key, $value) = (@$pair);
91 if ($key eq "docnum")
92 {
93 &setDocumentMetadata($collection, $doc_obj->get_OID() . "$section", $key, "", $value, $updateindex);
94 $found_docnum = 1;
95 }
96 }
97
98 if (!$found_docnum)
99 {
100 die("Fatal Error! Tried to add document without providing docnum");
101 }
102
103 # Add it piece by piece - this depends on the loading of a blank document
104 # working the way it should.
105 foreach my $pair (@$metadata)
106 {
107 my ($key, $value) = (@$pair);
108 if ($key ne "Identifier" && $key ne "docnum" && $key !~ /^gsdl/ && defined $value && $value ne "")
109 {
110 # escape problematic stuff
111 $value =~ s/\\/\\\\/g;
112 $value =~ s/\n/\\n/g;
113 $value =~ s/\r/\\r/g;
114 if ($value =~ /-{70,}/)
115 {
116 # if value contains 70 or more hyphens in a row we need
117 # to escape them to prevent txt2db from treating them
118 # as a separator
119 $value =~ s/-/&\#045;/gi;
120 }
121 # Go ahead and set the metadata
122 &setDocumentMetadata($collection, $doc_obj->get_OID() . "$section", $key, "", $value, $updateindex);
123 }
124 }
125 # We now have to load the browselist node too. We create a ClassifyTreeNode
126 # based on a dummy model.
127 # Note: only if section is the top section
128 if ($is_top)
129 {
130 my $dummy_model = new ClassifyTreeModel($collection, "");
131 my $browselist_node = new ClassifyTreeNode($dummy_model, "browselist");
132 # Add the document
133 $browselist_node->addDocument($doc_obj->get_OID());
134 }
135 # We now recursively move through the document objects child sections,
136 # adding them too. As we do this we build up a contains list for this
137 # document.
138 my $section_ptr = $doc_obj->_lookup_section($section);
139 my @contains = ();
140 if (defined $section_ptr)
141 {
142 foreach my $subsection (@{$section_ptr->{'subsection_order'}}) {
143 &addDocument($collection, $doc_obj, "$section.$subsection");
144 push(@contains, "\".$subsection");
145 }
146 }
147 # Done - clean up
148 }
149# /** addDocument() **/
150
151# /** Sets the metadata attached to a given document. This will update, at most,
152# * three different locations:
153# * 1. The Lucene index must be updated. This will involve removing any
154# * existing value and, if required, adding a new value in its place.
155# * 2. The GDBM database must be updated. Again any existing value will be
156# * removed and, if required, a new value added.
157# * 3. Finally a check against the collect.cfg will be done to determine if
158# * the changed metadata would have an effect on a classifier and, if so
159# * the classifier tree will be updated to remove, add or replace any
160# * tree nodes or node 'contains lists' as necessary.
161# *
162# * Pseudo Code:
163# * ------------
164# * To add metadata to the document NT1
165# * A. Establish connection to Lucene
166# * B. Create a IncrementalDocument object for 'NT1' loading the information
167# * from the GDBM
168# * C. Check to see if this metadata is used to build a classifier(s) and if
169# * so create the appropriate ClassifyTreeModel(s)
170# * D. If removing or replacing metadata:
171# * i/ Call ??? to remove key-value from Lucene index
172# * ii/ Use removeMetadata() to clear value in IncrementalDocument
173# * iii/ Call removeDocument() in ClassifyTreeModel(s) as necessary
174# * E. If adding or replacing metadata:
175# * i/ Call ??? to add key-value from Lucene index
176# * ii/ Use addMetadata() to add value in IncrementalDocument
177# * iii/ Call addDocument() in ClassifyTreeModel(s) as necessary
178# * F. Complete Lucene transaction
179# * G. Save IncrementalDocument to GDBM
180# * Note: ClassifyTreeModel automatically updates GDBM as necessary.
181# *
182# * @param $collection The name of the collection to update as a string
183# * @param $oid The unique identifier of a Greenstone document as a
184# * string
185# * @param $key The key of the metadata being added as a string
186# * @param $old_value The value of the metadata being removed/replaced
187# * or an empty string if adding metadata
188# * @param $new_value The value of the metadata being added/replacing
189# * or an empty string if removing metadata
190# * @param $updateindex 1 to get the index updated. This is used to prevent
191# * the indexes being changed when doing an incremental
192# * addition of a new document.
193# *
194# * @author John Thompson, DL Consulting Ltd.
195# */
196sub setDocumentMetadata()
197 {
198 my ($collection, $oid, $key, $old_value, $new_value, $updateindex) = @_;
199 print STDERR "IncrementalBuildUtils::setDocumentMetadata('$collection','$oid','$key','$old_value','$new_value',$updateindex)\n" unless !$debug;
200 # A. Establish connection to Lucene
201 # This isn't required at the moment, but might be later if we implement
202 # Lucene daemon.
203 # B. Create a IncrementalDocument object for 'NT1' loading the information
204 # from the GDBM
205 print STDERR "* creating incremental document for $oid\n" unless !$debug;
206 my $doc_obj = new IncrementalDocument($collection, $oid);
207 $doc_obj->loadDocument();
208 # C. Check to see if this metadata is used to build a classifier(s) and if
209 # so create the appropriate ClassifyTreeModel(s)
210 print STDERR "* load collection configuration\n" unless !$debug;
211 my $config_obj = &getConfigObj($collection);
212 my $clidx = 1;
213 my @classifier_tree_models = ();
214 foreach my $classifier (@{$config_obj->{'classify'}})
215 {
216 my $index = 0;
217 my $option_count = scalar(@{$classifier});
218 for ($index = 0; $index < $option_count; $index++)
219 {
220 if ($index + 1 < $option_count && @{$classifier}[$index] eq "-metadata" && @{$classifier}[$index + 1] eq $key)
221 {
222 # Create a tree model for this classifier
223 print STDERR "* creating a tree model for classifier: CL$clidx\n" unless !$debug;
224 my $tree_model_obj = new ClassifyTreeModel($collection, "CL" . $clidx);
225 # And store it for later
226 push(@classifier_tree_models, $tree_model_obj);
227 }
228 }
229 $clidx++;
230 }
231 # D. If removing or replacing metadata:
232 if (defined($old_value) && $old_value =~ /[\w\d]+/)
233 {
234 print STDERR "* removing '$key'='$old_value' from GDBM database for document $oid\n" unless !$debug;
235 # i/ Call ??? to remove key-value from Lucene index
236 # Moved elsewhere
237 # ii/ Use removeMetadata() to clear value in IncrementalDocument
238 $doc_obj->removeMetadata($key, $old_value);
239 # iii/ Call removeDocument() in ClassifyTreeModel(s) as necessary
240 foreach my $classifier_tree_model (@classifier_tree_models)
241 {
242 print STDERR "* removing '$old_value' from classifier tree\n" unless !$debug;
243 $classifier_tree_model->removeDocument($old_value, $oid, 1);
244 }
245 }
246 # E. If adding or replacing metadata:
247 if (defined($new_value) && $new_value =~ /[\w\d]+/)
248 {
249 print STDERR "* adding '$key'='$new_value' to GDBM database for document $oid\n" unless !$debug;
250 # i/ Call ??? to add key-value from Lucene index
251 # Moved elsewhere
252 # ii/ Use addMetadata() to add value in IncrementalDocument
253 $doc_obj->addMetadata($key, $new_value);
254 # iii/ Call addDocument() in ClassifyTreeModel(s) as necessary
255 foreach my $classifier_tree_model (@classifier_tree_models)
256 {
257 print STDERR "* adding '$new_value' to classifier tree\n" unless !$debug;
258 $classifier_tree_model->addDocument($new_value, $oid);
259 }
260 }
261 # F. Complete Lucene transaction
262 if(defined($updateindex) && $updateindex)
263 {
264 print STDERR "* updating Lucene indexes\n" unless !$debug;
265 &callGS2LuceneEditor($collection, $doc_obj->getDocNum, $key, $old_value, $new_value);
266 }
267 # G. Save IncrementalDocument to GDBM
268 $doc_obj->saveDocument();
269 $doc_obj = 0;
270 }
271# /** setDocumentMetadata() **/
272
273# /**
274# *
275# */
276sub callGS2LuceneDelete()
277 {
278 my ($collection, $docnum) = @_;
279
280 # Some path information that is the same for all indexes
281 my $classpath = &util::filename_cat($ENV{'GSDLHOME'},"bin","java","LuceneWrap.jar");
282 my $java_lucene = "org.nzdl.gsdl.LuceneWrap.GS2LuceneDelete";
283 my $indexpath = &util::filename_cat($ENV{'GSDLHOME'},"collect",$collection,"index");
284 # Determine what indexes need to be changed by opening the collections
285 # index path and searching for directories named *idx
286 # If the directory doesn't exist, then there is no built index, and nothing
287 # for us to do.
288 if(opendir(INDEXDIR, $indexpath))
289 {
290 my @index_files = readdir(INDEXDIR);
291 closedir(INDEXDIR);
292 # For each index that matches or pattern, we call the java application
293 # to change the index (as necessary - not every index will include the
294 # document we have been asked to modify)
295 foreach my $actual_index_dir (@index_files)
296 {
297 next unless $actual_index_dir =~ /idx$/;
298 # Determine the path to the index to modify
299 my $full_index_dir = &util::filename_cat($indexpath, $actual_index_dir);
300 # Call java to remove the document
301 my $cmd = "java -classpath \"$classpath\" $java_lucene --index $full_index_dir --nodeid $docnum";
302 print STDERR "CMD: " . $cmd . "\n" unless !$debug;
303 # Run command
304 my $result = `$cmd 2>&1`;
305 print STDERR $result unless !$debug;
306 }
307 }
308 # Done
309 }
310# /** callGS2LuceneDelete() **/
311
312# /**
313# */
314sub callGS2LuceneEditor()
315 {
316 my ($collection, $docnum, $key, $old_value, $new_value) = @_;
317
318 # Some path information that is the same for all indexes
319 my $classpath = &util::filename_cat($ENV{'GSDLHOME'},"collect",$collection,"java","classes");
320 my $jarpath = &util::filename_cat($ENV{'GSDLHOME'},"bin","java","LuceneWrap.jar");
321 my $java_lucene = "org.nzdl.gsdl.LuceneWrap.GS2LuceneEditor";
322 my $indexpath = &util::filename_cat($ENV{'GSDLHOME'},"collect",$collection,"index");
323 # And some commands that don't change
324 my $java_args = "";
325 # Append the node id
326 $java_args .= "--nodeid $docnum ";
327 # We have to convert the given metadata key into its two letter field code.
328 # We do this by looking in the build.cfg file.
329 my $field = &getFieldFromBuildCFG($indexpath, $key);
330 # The metadata field to change
331 $java_args .= "--field $field ";
332 # And the old and new values as necessary
333 if(defined($old_value) && $old_value =~ /[\w\d]+/)
334 {
335 $java_args .= "--oldvalue \"$old_value\" ";
336 }
337 if(defined($new_value) && $new_value =~ /[\w\d]+/)
338 {
339 $java_args .= "--newvalue \"$new_value\" ";
340 }
341 # Determine what indexes need to be changed by opening the collections
342 # index path and searching for directories named *idx
343 # If the directory doesn't exist, then there is no built index, and nothing
344 # for us to do.
345 # We also check if the field is something other than "". It is entirely
346 # possible that we have been asked to update a metadata field that isn't
347 # part of any index, so this is where we break out of editing the index if
348 # we have
349 if($field =~ /^\w\w$/ && opendir(INDEXDIR, $indexpath))
350 {
351 my @index_files = readdir(INDEXDIR);
352 closedir(INDEXDIR);
353 # For each index that matches or pattern, we call the java application
354 # to change the index (as necessary - not every index will include the
355 # document we have been asked to modify)
356 foreach my $actual_index_dir (@index_files)
357 {
358 next unless $actual_index_dir =~ /idx$/;
359 # Determine the path to the index to modify
360 my $full_index_dir = &util::filename_cat($indexpath, $actual_index_dir);
361 # And prepend to the command java arguments
362 my $cur_java_args = "--index $full_index_dir " . $java_args;
363 print STDERR "CMD: java -classpath \"$classpath:$jarpath\" $java_lucene $cur_java_args 2>&1\n" unless !$debug;
364 # Run command
365 my $result = `java -classpath \"$classpath:$jarpath\" $java_lucene $cur_java_args 2>&1`;
366 print STDERR $result unless !$debug;
367 }
368 }
369 # Done
370 }
371# /** callGS2LuceneEditor() **/
372
373## Remove a document from the GDBM and Index.
374#
375# @param collection The collection to alter
376# @param oid The unique identifier of the document to be removed
377##
378sub deleteDocument()
379 {
380 my ($collection, $oid) = @_;
381 # Load the incremental document to go with this oid, as we need some
382 # information from it.
383 my $doc_obj = new IncrementalDocument($collection, $oid);
384 $doc_obj->loadDocument();
385 # Check if this object even exists by retrieving the docnum.
386 my $doc_num = $doc_obj->getDocNum();
387 print STDERR "Removing document docnum: $doc_num\n" unless !$debug;
388 if ($doc_num > -1)
389 {
390 # Now use the GDBM utils to write a blank string to this oid in the
391 # database
392 my $index_text_directory_path = &util::filename_cat($ENV{'GSDLHOME'}, "collect", $collection, "index", "text");
393 my $infodb_file_path = &dbutil::get_infodb_file_path("gdbm", $collection, $index_text_directory_path);
394 my $infodb_file_handle = &dbutil::open_infodb_write_handle("gdbm", $infodb_file_path, "append");
395 &dbutil::write_infodb_entry("gdbm", $infodb_file_handle, $oid, &dbutil::convert_infodb_string_to_hash(""));
396 # Remove reverse lookup
397 &dbutil::write_infodb_entry("gdbm", $infodb_file_handle, $doc_num, &dbutil::convert_infodb_string_to_hash(""));
398 &dbutil::close_infodb_write_handle("gdbm", $infodb_file_handle);
399
400 # And remove from the database
401 &callGS2LuceneDelete($collection, $doc_num);
402
403 # Regenerate the classifier trees.
404 print STDERR "* load collection configuration\n";# unless !$debug;
405 my $config_obj = &getConfigObj($collection);
406 my $clidx = 1;
407 my %classifier_tree_models = ();
408 foreach my $classifier (@{$config_obj->{'classify'}})
409 {
410 my $index = 0;
411 my $option_count = scalar(@{$classifier});
412 for ($index = 0; $index < $option_count; $index++)
413 {
414 if ($index + 1 < $option_count && @{$classifier}[$index] eq "-metadata")
415 {
416 my $key = @{$classifier}[$index + 1];
417 # Create a tree model for this classifier
418 print STDERR "* creating a tree model for classifier: CL" . $clidx . " [" . $key . "]\n";# unless !$debug;
419 my $tree_model_obj = new ClassifyTreeModel($collection, "CL" . $clidx);
420 # And store it against its key for later
421 $classifier_tree_models{$key} = $tree_model_obj;
422 }
423 }
424 $clidx++;
425 }
426
427 # For each piece of metadata assigned to this document, if there is a
428 # matching classifier tree, remove the path from the tree.
429 print STDERR "* searching for classifier paths to be removed\n";
430
431 my $metadata = $doc_obj->getAllMetadata();
432 foreach my $pair (@$metadata)
433 {
434 my ($key, $value) = @$pair;
435 print STDERR "* testing " . $key . "=>" . $value . "\n";
436 if (defined($classifier_tree_models{$key}))
437 {
438 my $model = $classifier_tree_models{$key};
439 print STDERR "* removing '" . $value . "' from classifier " . $model->getRootNode()->getCLID() . "\n";
440 $model->removeDocument($value, $oid, 1);
441 }
442 }
443
444 # We also have to remove from browselist - the reverse process of
445 # adding to browselist shown above.
446 my $dummy_model = new ClassifyTreeModel($collection, "");
447 my $browselist_node = new ClassifyTreeNode($dummy_model, "browselist");
448 # Add the document
449 $browselist_node->removeDocument($oid);
450 # Clean up
451 }
452 # else, no document, no need to delete.
453 }
454## deleteDocument() ##
455
456# /**
457# */
458sub getFieldFromBuildCFG()
459 {
460 my ($indexpath, $key) = @_;
461 my $field = "";
462 my $build_cfg = &util::filename_cat($indexpath, "build.cfg");
463 # If there isn't a build.cfg then the index hasn't been built and there is
464 # nothing to do
465 if(open(BUILDCFG, $build_cfg))
466 {
467 # For each line of the build configuration
468 my $line;
469 while($line = <BUILDCFG>)
470 {
471 # Only interested in the indexfieldmap line
472 if($line =~ /^indexfieldmap\s+/)
473 {
474 # Extract the field information by looking up the key pair
475 if($line =~ /\s$key->(\w\w)/)
476 {
477 $field = $1;
478 }
479 }
480 }
481 # Done with file
482 close(BUILDCFG);
483 }
484 # Return whatever we found
485 return $field;
486 }
487# /** getFieldFromBuildCFG() **/
488
489
490
491
492
493# /** Retrieve an object (associative array) containing information about the
494# * collection configuration.
495# * @param $collection The shortname of the collection as a string
496# * @return An associative array containing information from the collect.cfg
497# * @author John Thompson, DL Consulting Ltd.
498# */
499sub getConfigObj()
500 {
501 my ($collection) = @_;
502
503 #rint STDERR "getConfigObj()\n" unless !$debug;
504
505 my $colcfgname = &util::filename_cat($ENV{'GSDLHOME'}, "collect", $collection, "etc", "collect.cfg");
506 if (!-e $colcfgname)
507 {
508 die "IncrementalBuildUtils - couldn't find collect.cfg for collection $collection\n";
509 }
510 return &colcfg::read_collect_cfg ($colcfgname);
511 }
512# /** getConfigObj() **/
513
5141;
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