source: main/trunk/greenstone2/perllib/inexport.pm@ 23943

Last change on this file since 23943 was 23943, checked in by ak19, 13 years ago

Xiaofeng encountered a problem with opening a file for writing in archives (a problem creating the earliestDatestamp file). Trying another way to exit on error.
  • Property svn:executable set to *
File size: 38.2 KB
Line 
1###########################################################################
2#
3# inexport.pm -- useful class to support import.pl and export.pl
4# A component of the Greenstone digital library software
5# from the New Zealand Digital Library Project at the
6# University of Waikato, New Zealand.
7#
8# Copyright (C) 1999 New Zealand Digital Library Project
9#
10# This program is free software; you can redistribute it and/or modify
11# it under the terms of the GNU General Public License as published by
12# the Free Software Foundation; either version 2 of the License, or
13# (at your option) any later version.
14#
15# This program is distributed in the hope that it will be useful,
16# but WITHOUT ANY WARRANTY; without even the implied warranty of
17# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
18# GNU General Public License for more details.
19#
20# You should have received a copy of the GNU General Public License
21# along with this program; if not, write to the Free Software
22# Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA.
23#
24###########################################################################
25
26package inexport;
27
28use strict;
29
30no strict 'refs'; # allow filehandles to be variables and vice versa
31no strict 'subs'; # allow barewords (eg STDERR) as function arguments
32
33use arcinfo;
34use colcfg;
35use dbutil;
36use doc;
37use plugin;
38use plugout;
39use manifest;
40use inexport;
41use util;
42use scriptutil;
43use FileHandle;
44use gsprintf 'gsprintf';
45use printusage;
46use parse2;
47
48use File::Basename;
49
50sub new
51{
52 my $class = shift (@_);
53 my ($mode,$argv,$options,$opt_listall_options) = @_;
54
55 my $self = { 'xml' => 0, 'mode' => $mode };
56
57 # general options available to all plugins
58 my $arguments = $options->{'args'};
59 my $intArgLeftinAfterParsing = parse2::parse($argv,$arguments,$self,"allow_extra_options");
60 # Parse returns -1 if something has gone wrong
61 if ($intArgLeftinAfterParsing == -1)
62 {
63 &PrintUsage::print_txt_usage($options, "{import.params}");
64 die "\n";
65 }
66
67 my $language = $self->{'language'};
68 # If $language has been specified, load the appropriate resource bundle
69 # (Otherwise, the default resource bundle will be loaded automatically)
70 if ($language && $language =~ /\S/) {
71 &gsprintf::load_language_specific_resource_bundle($language);
72 }
73
74 if ($self->{'listall'}) {
75 if ($self->{'xml'}) {
76 &PrintUsage::print_xml_usage($opt_listall_options);
77 }
78 else
79 {
80 &PrintUsage::print_txt_usage($opt_listall_options,"{export.params}");
81 }
82 die "\n";
83 }
84
85
86 if ($self->{'xml'}) {
87 &PrintUsage::print_xml_usage($options);
88 print "\n";
89 return bless $self, $class;
90 }
91
92 if ($self->{'gli'}) { # the gli wants strings to be in UTF-8
93 &gsprintf::output_strings_in_UTF8;
94 }
95
96 # now check that we had exactly one leftover arg, which should be
97 # the collection name. We don't want to do this earlier, cos
98 # -xml arg doesn't need a collection name
99 # Or if the user specified -h, then we output the usage also
100
101 if ($intArgLeftinAfterParsing != 1 || (@$argv && $argv->[0] =~ /^\-+h/))
102 {
103 &PrintUsage::print_txt_usage($options, "{import.params}");
104 die "\n";
105 }
106
107 $self->{'close_out'} = 0;
108 my $out = $self->{'out'};
109 if ($out !~ /^(STDERR|STDOUT)$/i) {
110 open (OUT, ">$out") ||
111 (&gsprintf(STDERR, "{common.cannot_open_output_file}: $!\n", $out) && die);
112 $out = 'inexport::OUT';
113 $self->{'close_out'} = 1;
114 }
115 $out->autoflush(1);
116 $self->{'out'} = $out;
117
118 # @ARGV should be only one item, the name of the collection
119 $self->{'collection'} = shift @$argv;
120
121 if ((defined $self->{'jobs'}) && ($self->{'jobs'}>1)) {
122 require ParallelInexport;
123 }
124
125 return bless $self, $class;
126}
127
128# Simplified version of the contstructor for use with CGI scripts
129sub newCGI
130{
131 my $class = shift (@_);
132 my ($mode,$collect,$gsdl_cgi,$opt_site) = @_;
133
134 my $self = { 'xml' => 0, 'mode' => $mode };
135
136 $self->{'out'} = STDERR;
137
138 if (defined $gsdl_cgi) {
139 $self->{'site'} = $opt_site;
140 my $collect_dir = $gsdl_cgi->get_collection_dir($opt_site);
141 $self->{'collectdir'} = $collect_dir;
142 }
143 else {
144 $self->{'site'} = "";
145 $self->{'collectdir'} = &util::filename_cat($ENV{'GSDLHOME'},"collect");
146 }
147 $self->{'faillog'} = "";
148
149 $self->{'collection'} = $collect;
150
151 return bless $self, $class;
152}
153sub get_collection
154{
155 my $self = shift @_;
156
157 return $self->{'collection'};
158}
159
160
161sub read_collection_cfg
162{
163 my $self = shift @_;
164 my ($collection,$options) = @_;
165
166 my $collectdir = $self->{'collectdir'};
167 my $site = $self->{'site'};
168 my $out = $self->{'out'};
169
170 if (($collection = &colcfg::use_collection($site, $collection, $collectdir)) eq "") {
171 &PrintUsage::print_txt_usage($options, "{import.params}");
172 die "\n";
173 }
174
175 # add collection's perllib dir into include path in
176 # case we have collection specific modules
177 unshift (@INC, "$ENV{'GSDLCOLLECTDIR'}/perllib");
178
179 # check that we can open the faillog
180 my $faillog = $self->{'faillog'};
181 if ($faillog eq "") {
182 $faillog = &util::filename_cat($ENV{'GSDLCOLLECTDIR'}, "etc", "fail.log");
183 }
184 open (FAILLOG, ">$faillog") ||
185 (&gsprintf(STDERR, "{import.cannot_open_fail_log}\n", $faillog) && die);
186
187
188 my $faillogname = $faillog;
189 $faillog = 'inexport::FAILLOG';
190 $faillog->autoflush(1);
191 $self->{'faillog'} = $faillog;
192 $self->{'faillogname'} = $faillogname;
193
194 # Read in the collection configuration file.
195 my ($config_filename, $gs_mode) = &colcfg::get_collect_cfg_name($out);
196 my $collectcfg = &colcfg::read_collection_cfg ($config_filename, $gs_mode);
197
198 return ($config_filename,$collectcfg);
199}
200
201sub set_collection_options
202{
203 my $self = shift @_;
204 my ($collectcfg) = @_;
205
206 my $inexport_mode = $self->{'mode'};
207
208 my $verbosity = $self->{'verbosity'};
209 my $debug = $self->{'debug'};
210 my $importdir = $self->{'importdir'};
211 my $archivedir = $self->{'archivedir'} || $self->{'exportdir'} || "";
212 my $out = $self->{'out'};
213
214 # If the infodbtype value wasn't defined in the collect.cfg file, use the default
215 if (!defined($collectcfg->{'infodbtype'}))
216 {
217 $collectcfg->{'infodbtype'} = &dbutil::get_default_infodb_type();
218 }
219 if ($collectcfg->{'infodbtype'} eq "gdbm-txtgz") {
220 # we can't use the text version for archives dbs.
221 $collectcfg->{'infodbtype'} = "gdbm";
222 }
223 if (defined $collectcfg->{'importdir'} && $importdir eq "") {
224 $importdir = $collectcfg->{'importdir'};
225 }
226 if (defined $collectcfg->{'archivedir'} && $archivedir eq "") {
227 $archivedir = $collectcfg->{'archivedir'};
228 }
229 # fill in the default import and archives directories if none
230 # were supplied, turn all \ into / and remove trailing /
231 $importdir = &util::filename_cat ($ENV{'GSDLCOLLECTDIR'}, "import") if $importdir eq "";
232 $importdir =~ s/[\\\/]+/\//g;
233 $importdir =~ s/\/$//;
234 if (!-e $importdir) {
235 &gsprintf($out, "{import.no_import_dir}\n\n", $importdir);
236 die "\n";
237 }
238 $self->{'importdir'} = $importdir;
239
240 if ($archivedir eq "") {
241 if ($inexport_mode eq "import") {
242 $archivedir = &util::filename_cat ($ENV{'GSDLCOLLECTDIR'}, "archives");
243 }
244 elsif ($inexport_mode eq "export") {
245 $archivedir = &util::filename_cat ($ENV{'GSDLCOLLECTDIR'}, "export");
246 }
247 else {
248 print STDERR "Warning: Unrecognized import/export mode '$inexport_mode'\n";
249 print STDERR " Defaulting to 'archives' for file output\n";
250 $archivedir = &util::filename_cat ($ENV{'GSDLCOLLECTDIR'}, "archives");
251 }
252 }
253
254 $archivedir =~ s/[\\\/]+/\//g;
255 $archivedir =~ s/\/$//;
256 $self->{'archivedir'} = $archivedir;
257
258 if ($verbosity !~ /\d+/) {
259 if (defined $collectcfg->{'verbosity'} && $collectcfg->{'verbosity'} =~ /\d+/) {
260 $verbosity = $collectcfg->{'verbosity'};
261 } else {
262 $verbosity = 2; # the default
263 }
264 }
265 $self->{'verbosity'} = $verbosity;
266
267 if (defined $collectcfg->{'manifest'} && $self->{'manifest'} eq "") {
268 $self->{'manifest'} = $collectcfg->{'manifest'};
269 }
270
271 if (defined $collectcfg->{'gzip'} && !$self->{'gzip'}) {
272 if ($collectcfg->{'gzip'} =~ /^true$/i) {
273 $self->{'gzip'} = 1;
274 }
275 }
276
277 if ($self->{'maxdocs'} !~ /\-?\d+/) {
278 if (defined $collectcfg->{'maxdocs'} && $collectcfg->{'maxdocs'} =~ /\-?\d+/) {
279 $self->{'maxdocs'} = $collectcfg->{'maxdocs'};
280 } else {
281 $self->{'maxdocs'} = -1; # the default
282 }
283 }
284
285 if ((defined $self->{'groupsize'}) && ($self->{'groupsize'} == 1)) {
286 if (defined $collectcfg->{'groupsize'} && $collectcfg->{'groupsize'} =~ /\d+/) {
287 $self->{'groupsize'} = $collectcfg->{'groupsize'};
288 }
289 }
290
291 if (!defined $self->{'OIDtype'}
292 || ($self->{'OIDtype'} !~ /^(hash|incremental|assigned|dirname)$/ )) {
293 if (defined $collectcfg->{'OIDtype'}
294 && $collectcfg->{'OIDtype'} =~ /^(hash|incremental|assigned|dirname)$/) {
295 $self->{'OIDtype'} = $collectcfg->{'OIDtype'};
296 } else {
297 $self->{'OIDtype'} = "hash"; # the default
298 }
299 }
300
301 if ((!defined $self->{'OIDmetadata'}) || ($self->{'OIDmetadata'} eq "")) {
302 if (defined $collectcfg->{'OIDmetadata'}) {
303 $self->{'OIDmetadata'} = $collectcfg->{'OIDmetadata'};
304 } else {
305 $self->{'OIDmetadata'} = "dc.Identifier"; # the default
306 }
307 }
308
309 my $sortmeta = $self->{'sortmeta'};
310 if (defined $collectcfg->{'sortmeta'} && (!defined $sortmeta || $sortmeta eq "")) {
311 $sortmeta = $collectcfg->{'sortmeta'};
312 }
313 # sortmeta cannot be used with group size
314 $sortmeta = undef unless defined $sortmeta && $sortmeta =~ /\S/;
315 if (defined $sortmeta && $self->{'groupsize'} > 1) {
316 &gsprintf($out, "{import.cannot_sort}\n\n");
317 $sortmeta = undef;
318 }
319 $self->{'sortmeta'} = $sortmeta;
320
321 if (defined $collectcfg->{'removeprefix'} && $self->{'removeprefix'} eq "") {
322 $self->{'removeprefix'} = $collectcfg->{'removeprefix'};
323 }
324
325 if (defined $collectcfg->{'removesuffix'} && $self->{'removesuffix'} eq "") {
326 $self->{'removesuffix'} = $collectcfg->{'removesuffix'};
327 }
328 if (defined $collectcfg->{'debug'} && $collectcfg->{'debug'} =~ /^true$/i) {
329 $self->{'debug'} = 1;
330 }
331 if (defined $collectcfg->{'gli'} && $collectcfg->{'gli'} =~ /^true$/i) {
332 $self->{'gli'} = 1;
333 }
334 $self->{'gli'} = 0 unless defined $self->{'gli'};
335
336 # check keepold and removeold
337 my $checkdir = ($inexport_mode eq "import") ? "archives" : "export";
338
339 my ($removeold, $keepold, $incremental, $incremental_mode)
340 = &scriptutil::check_removeold_and_keepold($self->{'removeold'}, $self->{'keepold'},
341 $self->{'incremental'}, $checkdir,
342 $collectcfg);
343
344 $self->{'removeold'} = $removeold;
345 $self->{'keepold'} = $keepold;
346 $self->{'incremental'} = $incremental;
347 $self->{'incremental_mode'} = $incremental_mode;
348}
349
350sub process_files
351{
352 my $self = shift @_;
353 my ($config_filename,$collectcfg) = @_;
354
355 my $inexport_mode = $self->{'mode'};
356
357 my $verbosity = $self->{'verbosity'};
358 my $debug = $self->{'debug'};
359
360 my $importdir = $self->{'importdir'};
361 my $archivedir = $self->{'archivedir'} || $self->{'exportdir'};
362
363 my $incremental = $self->{'incremental'};
364 my $incremental_mode = $self->{'incremental_mode'};
365
366 my $removeold = $self->{'removeold'};
367 my $keepold = $self->{'keepold'};
368
369 my $saveas = $self->{'saveas'};
370 my $OIDtype = $self->{'OIDtype'};
371 my $OIDmetadata = $self->{'OIDmetadata'};
372
373 my $out = $self->{'out'};
374 my $faillog = $self->{'faillog'};
375
376 my $maxdocs = $self->{'maxdocs'};
377 my $gzip = $self->{'gzip'};
378 my $groupsize = $self->{'groupsize'};
379 my $sortmeta = $self->{'sortmeta'};
380
381 my $removeprefix = $self->{'removeprefix'};
382 my $removesuffix = $self->{'removesuffix'};
383
384 my $gli = $self->{'gli'};
385
386 my $jobs = $self->{'jobs'};
387 my $epoch = $self->{'epoch'};
388
389 # related to export
390 my $xsltfile = $self->{'xsltfile'};
391 my $group_marc = $self->{'group_marc'};
392 my $mapping_file = $self->{'mapping_file'};
393 my $xslt_mets = $self->{'xslt_mets'};
394 my $xslt_txt = $self->{'xslt_txt'};
395 my $fedora_namespace = $self->{'fedora_namespace'};
396 my $metadata_prefix = $self->{'metadata_prefix'};
397
398 if ($inexport_mode eq "import") {
399 print STDERR "<Import>\n" if $gli;
400 }
401 else {
402 print STDERR "<export>\n" if $gli;
403 }
404
405 my $manifest_lookup = new manifest($collectcfg->{'infodbtype'},$archivedir);
406 if ($self->{'manifest'} ne "") {
407 my $manifest_filename = $self->{'manifest'};
408
409 if (!&util::filename_is_absolute($manifest_filename)) {
410 $manifest_filename = &util::filename_cat ($ENV{'GSDLCOLLECTDIR'}, $manifest_filename);
411 }
412
413 $self->{'manifest'} =~ s/[\\\/]+/\//g;
414 $self->{'manifest'} =~ s/\/$//;
415
416 $manifest_lookup->parse($manifest_filename);
417 }
418
419 my $manifest = $self->{'manifest'};
420
421 # load all the plugins
422 my $plugins = [];
423 if (defined $collectcfg->{'plugin'}) {
424 $plugins = $collectcfg->{'plugin'};
425 }
426
427 my $plugin_incr_mode = $incremental_mode;
428 if ($manifest ne "") {
429 # if we have a manifest file, then we pretend we are fully incremental for plugins
430 $plugin_incr_mode = "all";
431 }
432 #some global options for the plugins
433 my @global_opts = ();
434
435 my $pluginfo = &plugin::load_plugins ($plugins, $verbosity, $out, $faillog, \@global_opts, $plugin_incr_mode);
436 if (scalar(@$pluginfo) == 0) {
437 &gsprintf($out, "{import.no_plugins_loaded}\n");
438 die "\n";
439 }
440
441 # remove the old contents of the archives directory (and tmp directory) if needed
442 if ($removeold) {
443 if (-e $archivedir) {
444 &gsprintf($out, "{import.removing_archives}\n");
445 &util::rm_r ($archivedir);
446 }
447 my $tmpdir = &util::filename_cat ($ENV{'GSDLCOLLECTDIR'}, "tmp");
448 $tmpdir =~ s/[\\\/]+/\//g;
449 $tmpdir =~ s/\/$//;
450 if (-e $tmpdir) {
451 &gsprintf($out, "{import.removing_tmpdir}\n");
452 &util::rm_r ($tmpdir);
453 }
454 }
455
456 # create the archives dir if needed
457 &util::mk_all_dir($archivedir);
458
459 # read the archive information file
460
461 # BACKWARDS COMPATIBILITY: Just in case there are old .ldb/.bdb files (won't do anything for other infodbtypes)
462 &util::rename_ldb_or_bdb_file(&util::filename_cat($archivedir, "archiveinf-doc"));
463 &util::rename_ldb_or_bdb_file(&util::filename_cat($archivedir, "archiveinf-src"));
464
465 my $arcinfo_doc_filename = &dbutil::get_infodb_file_path($collectcfg->{'infodbtype'}, "archiveinf-doc", $archivedir);
466 my $arcinfo_src_filename = &dbutil::get_infodb_file_path($collectcfg->{'infodbtype'}, "archiveinf-src", $archivedir);
467
468 my $archive_info = new arcinfo ($collectcfg->{'infodbtype'});
469 $archive_info->load_info ($arcinfo_doc_filename);
470
471 if ($manifest eq "") {
472 # Load in list of files in import folder from last import (if present)
473 $archive_info->load_prev_import_filelist ($arcinfo_src_filename);
474 }
475
476 ####Use Plugout####
477 my $plugout;
478
479 if ($inexport_mode eq "import") {
480 if (defined $collectcfg->{'plugout'}) {
481 # If a plugout was specified in the collect.cfg file, assume it is sensible
482 # We can't check the name because it could be anything, if it is a custom plugout
483 $plugout = $collectcfg->{'plugout'};
484 }
485 else{
486 if ($saveas !~ /^(GreenstoneXML|GreenstoneMETS)$/) {
487 push @$plugout,"GreenstoneXMLPlugout";
488 }
489 else{
490 push @$plugout,$saveas."Plugout";
491 }
492 }
493 }
494 else {
495 if (defined $collectcfg->{'plugout'} && $collectcfg->{'plugout'} =~ /^(.*METS|DSpace|MARCXML)Plugout/) {
496 $plugout = $collectcfg->{'plugout'};
497 }
498 else{
499 if ($saveas !~ /^(GreenstoneMETS|FedoraMETS|DSpace|MARCXML)$/) {
500 push @$plugout,"GreenstoneMETSPlugout";
501 }
502 else{
503 push @$plugout,$saveas."Plugout";
504 }
505 }
506 }
507
508 my $plugout_name = $plugout->[0];
509
510 push @$plugout,("-output_info",$archive_info) if (defined $archive_info);
511 push @$plugout,("-verbosity",$verbosity) if (defined $verbosity);
512 push @$plugout,("-debug") if ($debug);
513 push @$plugout,("-group_size",$groupsize) if (defined $groupsize);
514 push @$plugout,("-gzip_output") if ($gzip);
515 push @$plugout,("-output_handle",$out) if (defined $out);
516
517 push @$plugout,("-xslt_file",$xsltfile) if (defined $xsltfile && $xsltfile ne "");
518
519 if ($plugout_name =~ m/^MARCXMLPlugout$/) {
520 push @$plugout,("-group") if ($group_marc);
521 push @$plugout,("-mapping_file",$mapping_file) if (defined $mapping_file && $mapping_file ne "");
522 }
523 if ($plugout_name =~ m/^.*METSPlugout$/) {
524 push @$plugout,("-xslt_mets",$xslt_mets) if (defined $xslt_mets && $xslt_mets ne "");
525 push @$plugout,("-xslt_txt",$xslt_txt) if (defined $xslt_txt && $xslt_txt ne "");
526 }
527
528 if ($plugout_name eq "FedoraMETSPlugout") {
529 push @$plugout,("-fedora_namespace",$fedora_namespace) if (defined $fedora_namespace && $fedora_namespace ne "");
530 }
531
532 if ($plugout_name eq "DSpacePlugout") {
533 push @$plugout,("-metadata_prefix",$metadata_prefix) if (defined $metadata_prefix && $metadata_prefix ne "");
534 }
535
536 my $processor = &plugout::load_plugout($plugout);
537 $processor->setoutputdir ($archivedir);
538 $processor->set_sortmeta ($sortmeta, $removeprefix, $removesuffix) if defined $sortmeta;
539 $processor->set_OIDtype ($OIDtype, $OIDmetadata);
540
541 &plugin::begin($pluginfo, $importdir, $processor, $maxdocs, $gli);
542
543 if ($removeold) {
544 # occasionally, plugins may want to do something on remove old, eg pharos image indexing
545 &plugin::remove_all($pluginfo, $importdir, $processor, $maxdocs, $gli);
546 }
547
548 # process the import directory
549 my $block_hash = {};
550 $block_hash->{'new_files'} = {};
551 $block_hash->{'reindex_files'} = {};
552 my $metadata = {};
553
554 # global blocking pass may set up some metadata
555 &plugin::file_block_read($pluginfo, $importdir, "", $block_hash, $metadata, $gli);
556
557 if ($manifest ne "") {
558 #
559 # 1. Process delete files first
560 #
561 my @deleted_files = keys %{$manifest_lookup->{'delete'}};
562 my @full_deleted_files = ();
563
564 # ensure all filenames are absolute
565 foreach my $df (@deleted_files) {
566 my $full_df =
567 (&util::filename_is_absolute($df))
568 ? $df
569 : &util::filename_cat($importdir,$df);
570
571 if (-d $full_df) {
572 &add_dir_contents_to_list($full_df, \@full_deleted_files);
573 } else {
574 push(@full_deleted_files,$full_df);
575 }
576 }
577
578 &plugin::remove_some($pluginfo, $collectcfg->{'infodbtype'}, $archivedir, \@full_deleted_files);
579 mark_docs_for_deletion($archive_info,{},
580 \@full_deleted_files,
581 $archivedir, $verbosity, "delete");
582
583
584 #
585 # 2. Now files for reindexing
586 #
587
588 my @reindex_files = keys %{$manifest_lookup->{'reindex'}};
589 my @full_reindex_files = ();
590 # ensure all filenames are absolute
591 foreach my $rf (@reindex_files) {
592 my $full_rf =
593 (&util::filename_is_absolute($rf))
594 ? $rf
595 : &util::filename_cat($importdir,$rf);
596
597 if (-d $full_rf) {
598 &add_dir_contents_to_list($full_rf, \@full_reindex_files);
599 } else {
600 push(@full_reindex_files,$full_rf);
601 }
602 }
603
604 &plugin::remove_some($pluginfo, $collectcfg->{'infodbtype'}, $archivedir, \@full_reindex_files);
605 mark_docs_for_deletion($archive_info,{},\@full_reindex_files, $archivedir,$verbosity, "reindex");
606
607 # And now to ensure the new version of the file processed by
608 # appropriate plugin, we need to add it to block_hash reindex list
609 foreach my $full_rf (@full_reindex_files) {
610 $block_hash->{'reindex_files'}->{$full_rf} = 1;
611 }
612
613
614 #
615 # 3. Now finally any new files - add to block_hash new_files list
616 #
617
618 my @new_files = keys %{$manifest_lookup->{'index'}};
619 my @full_new_files = ();
620
621 foreach my $nf (@new_files) {
622 # ensure filename is absolute
623 my $full_nf =
624 (&util::filename_is_absolute($nf))
625 ? $nf
626 : &util::filename_cat($importdir,$nf);
627
628 if (-d $full_nf) {
629 &add_dir_contents_to_list($full_nf, \@full_new_files);
630 } else {
631 push(@full_new_files,$full_nf);
632 }
633 }
634
635 my $arcinfo_src_filename = &dbutil::get_infodb_file_path($collectcfg->{'infodbtype'}, "archiveinf-src", $archivedir);
636 my $arcinfodb_map = {};
637 &dbutil::read_infodb_file($collectcfg->{'infodbtype'}, $arcinfo_src_filename, $arcinfodb_map);
638 foreach my $f (@full_new_files) {
639 # check that we haven't seen it already
640 if (defined $arcinfodb_map->{$f}) {
641 # TODO make better warning
642 print STDERR "Warning: $f already in src archive, \n";
643 } else {
644 $block_hash->{'new_files'}->{$f} = 1;
645 }
646 }
647
648 undef $arcinfodb_map;
649 }
650 else {
651 # if incremental, we read through the import folder to see whats changed.
652
653 if ($incremental || $incremental_mode eq "onlyadd") {
654 prime_doc_oid_count($archivedir);
655
656 # Can now work out which files were new, already existed, and have
657 # been deleted
658
659 new_vs_old_import_diff($archive_info,$block_hash,$importdir,
660 $archivedir,$verbosity,$incremental_mode);
661
662 my @new_files = sort keys %{$block_hash->{'new_files'}};
663 if (scalar(@new_files>0)) {
664 print STDERR "New files and modified metadata files since last import:\n ";
665 print STDERR join("\n ",@new_files), "\n";
666 }
667
668 if ($incremental) {
669 # only look for deletions if we are truely incremental
670 my @deleted_files = sort keys %{$block_hash->{'deleted_files'}};
671 # Filter out any in gsdl/tmp area
672 my @filtered_deleted_files = ();
673 my $gsdl_tmp_area = &util::filename_cat($ENV{'GSDLHOME'}, "tmp");
674 my $collect_tmp_area = &util::filename_cat($ENV{'GSDLCOLLECTDIR'}, "tmp");
675 $gsdl_tmp_area = &util::filename_to_regex($gsdl_tmp_area);
676 $collect_tmp_area = &util::filename_to_regex($collect_tmp_area);
677
678 foreach my $df (@deleted_files) {
679 next if ($df =~ m/^$gsdl_tmp_area/);
680 next if ($df =~ m/^$collect_tmp_area/);
681
682 push(@filtered_deleted_files,$df);
683 }
684
685
686 @deleted_files = @filtered_deleted_files;
687
688 if (scalar(@deleted_files)>0) {
689 print STDERR "Files deleted since last import:\n ";
690 print STDERR join("\n ",@deleted_files), "\n";
691
692
693 &plugin::remove_some($pluginfo, $collectcfg->{'infodbtype'}, $archivedir, \@deleted_files);
694
695 mark_docs_for_deletion($archive_info,$block_hash,\@deleted_files, $archivedir,$verbosity, "delete");
696 }
697
698 my @reindex_files = sort keys %{$block_hash->{'reindex_files'}};
699
700 if (scalar(@reindex_files)>0) {
701 print STDERR "Files to reindex since last import:\n ";
702 print STDERR join("\n ",@reindex_files), "\n";
703 &plugin::remove_some($pluginfo, $collectcfg->{'infodbtype'}, $archivedir, \@reindex_files);
704 mark_docs_for_deletion($archive_info,$block_hash,\@reindex_files, $archivedir,$verbosity, "reindex");
705 }
706
707 }
708 }
709 }
710
711 # Check for existence of the file that's to contain earliestDateStamp in archivesdir
712 # Do nothing if the file already exists (file exists on incremental build).
713 # If the file doesn't exist, as happens on full build, create it and write out the current datestamp into it
714 # In buildcol, read the file's contents and set the earliestdateStamp in GS2's build.cfg / GS3's buildconfig.xml
715 # In doc.pm have set_oaiLastModified similar to set_lastmodified, and create the doc fields
716 # oailastmodified and oailastmodifieddate
717 my $earliestDatestampFile = &util::filename_cat($archivedir, "earliestDatestamp");
718 if (!-f $earliestDatestampFile && -d $archivedir) {
719 my $current_time_in_seconds = time; # in seconds
720 open(FOUT, ">$earliestDatestampFile") ||
721 (&gsprintf(STDERR, "{common.cannot_open}: $!\n", $earliestDatestampFile) && die);
722 # die "{common.cannot_open} $earliestDatestampFile: $!\n";
723 print FOUT $current_time_in_seconds;
724 close(FOUT);
725 }
726
727 # now, whichever mode we are in, we can process the entire import folder
728 if ((defined $jobs) && ($jobs > 1))
729 {
730 # if jobs are set to >1, run in parallel using MPI helper
731 # [hs, 1 july 2010]
732 &ParallelInexport::farm_out_processes($jobs, $epoch, $importdir, $block_hash,
733 $self->{'collection'}, $self->{'site'});
734 }
735 else
736 {
737 &plugin::read ($pluginfo, $importdir, "", $block_hash, $metadata, $processor, $maxdocs, 0, $gli);
738 }
739
740
741 if ($saveas eq "FedoraMETS") {
742 # create collection "doc obj" for Fedora that contains
743 # collection-level metadata
744
745 my $doc_obj = new doc($config_filename,"nonindexed_doc","none");
746 $doc_obj->set_OID("collection");
747
748 my $col_name = undef;
749 my $col_meta = $collectcfg->{'collectionmeta'};
750
751 if (defined $col_meta) {
752 store_collectionmeta($col_meta,"collectionname",$doc_obj); # in GS3 this is a collection's name
753 store_collectionmeta($col_meta,"collectionextra",$doc_obj); # in GS3 this is a collection's description
754 }
755 $processor->process($doc_obj);
756 }
757
758 &plugin::end($pluginfo, $processor);
759
760 &plugin::deinit($pluginfo, $processor);
761
762 # Store the value of OIDCount (used in doc.pm) so it can be
763 # restored correctly to this value on an incremental build
764 store_doc_oid_count($archivedir);
765
766 # write out the archive information file
767 $processor->close_file_output() if (defined $groupsize) && ($groupsize > 1);
768 $processor->close_group_output() if $processor->is_group();
769
770 # for backwards compatability with archvies.inf file
771 if ($arcinfo_doc_filename =~ m/(contents)|(\.inf)$/) {
772 $archive_info->save_info($arcinfo_doc_filename);
773 }
774 else {
775 $archive_info->save_revinfo_db($arcinfo_src_filename);
776 }
777
778 return $pluginfo;
779}
780
781
782sub generate_statistics
783{
784 my $self = shift @_;
785 my ($pluginfo) = @_;
786
787 my $inexport_mode = $self->{'mode'};
788
789 my $statsfile = $self->{'statsfile'};
790 my $out = $self->{'out'};
791 my $faillogname = $self->{'faillogname'};
792 my $gli = $self->{'gli'};
793 my $jobs = $self->{'jobs'};
794
795 # write out import stats
796
797 if ((!defined $jobs) || ($jobs == 1))
798 {
799 # only output statistics if there are multiple jobs
800 # [hs, 1 july 2010]
801
802 my $close_stats = 0;
803 if ($statsfile !~ /^(STDERR|STDOUT)$/i) {
804 if (open (STATS, ">$statsfile")) {
805 $statsfile = 'inexport::STATS';
806 $close_stats = 1;
807 } else {
808 &gsprintf($out, "{import.cannot_open_stats_file}", $statsfile);
809 &gsprintf($out, "{import.stats_backup}\n");
810 $statsfile = 'STDERR';
811 }
812 }
813
814 &gsprintf($out, "\n");
815 &gsprintf($out, "*********************************************\n");
816 &gsprintf($out, "{$inexport_mode.complete}\n");
817 &gsprintf($out, "*********************************************\n");
818
819 &plugin::write_stats($pluginfo, $statsfile, $faillogname, $gli);
820 if ($close_stats) {
821 close STATS;
822 }
823 }
824
825 close OUT if $self->{'close_out'};
826 close FAILLOG;
827}
828
829
830sub store_collectionmeta
831{
832 my ($collectionmeta,$field,$doc_obj) = @_;
833
834 my $section = $doc_obj->get_top_section();
835
836 my $field_hash = $collectionmeta->{$field};
837
838 foreach my $k (keys %$field_hash)
839 {
840 my $val = $field_hash->{$k};
841
842 ### print STDERR "*** $k = $field_hash->{$k}\n";
843
844 my $md_label = "ex.$field";
845
846
847 if ($k =~ m/^\[l=(.*?)\]$/)
848 {
849
850 my $md_suffix = $1;
851 $md_label .= "^$md_suffix";
852 }
853
854
855 $doc_obj->add_utf8_metadata($section,$md_label, $val);
856
857 # see collConfigxml.pm: GS2's "collectionextra" is called "description" in GS3,
858 # while "collectionname" in GS2 is called "name" in GS3.
859 # Variable $nameMap variable in collConfigxml.pm maps between GS2 and GS3
860 if (($md_label eq "ex.collectionname^en") || ($md_label eq "ex.collectionname"))
861 {
862 $doc_obj->add_utf8_metadata($section,"dc.Title", $val);
863 }
864
865 }
866}
867
868
869sub oid_count_file {
870 my ($archivedir) = @_;
871 return &util::filename_cat ($archivedir, "OIDcount");
872}
873
874
875sub prime_doc_oid_count
876{
877 my ($archivedir) = @_;
878 my $oid_count_filename = &oid_count_file($archivedir);
879
880 if (-e $oid_count_filename) {
881 if (open(OIDIN,"<$oid_count_filename")) {
882 my $OIDcount = <OIDIN>;
883 chomp $OIDcount;
884 close(OIDIN);
885
886 $doc::OIDcount = $OIDcount;
887 }
888 else {
889
890 print STDERR "Warning: unable to read document OID count from $oid_count_filename\n";
891 print STDERR "Setting value to 0\n";
892 }
893 }
894
895}
896
897sub store_doc_oid_count
898{
899 # Use the file "OIDcount" in the archives directory to record
900 # what value doc.pm got up to
901
902 my ($archivedir) = @_;
903 my $oid_count_filename = &oid_count_file($archivedir);
904
905
906 if (open(OIDOUT,">$oid_count_filename")) {
907 print OIDOUT $doc::OIDcount, "\n";
908
909 close(OIDOUT);
910 }
911 else {
912 print STDERR "Warning: unable to store document OID count\n";
913 }
914}
915
916
917
918sub new_vs_old_import_diff
919{
920 my ($archive_info,$block_hash,$importdir,$archivedir,$verbosity,$incremental_mode) = @_;
921
922 # Get the infodbtype value for this collection from the arcinfo object
923 my $infodbtype = $archive_info->{'infodbtype'};
924
925 # in this method, we want to know if metadata files are modified or not.
926 my $arcinfo_doc_filename = &dbutil::get_infodb_file_path($infodbtype, "archiveinf-doc", $archivedir);
927
928 my $archiveinf_timestamp = -M $arcinfo_doc_filename;
929
930 # First convert all files to absolute form
931 # This is to support the situation where the import folder is not
932 # the default
933
934 my $prev_all_files = $archive_info->{'prev_import_filelist'};
935 my $full_prev_all_files = {};
936
937 foreach my $prev_file (keys %$prev_all_files) {
938
939 if (!&util::filename_is_absolute($prev_file)) {
940 my $full_prev_file = &util::filename_cat($ENV{'GSDLCOLLECTDIR'},$prev_file);
941 $full_prev_all_files->{$full_prev_file} = $prev_file;
942 }
943 else {
944 $full_prev_all_files->{$prev_file} = $prev_file;
945 }
946 }
947
948
949 # Figure out which are the new files, existing files and so
950 # by implication the files from the previous import that are not
951 # there any more => mark them for deletion
952 foreach my $curr_file (keys %{$block_hash->{'all_files'}}) {
953
954 my $full_curr_file = $curr_file;
955
956 # entry in 'all_files' is moved to either 'existing_files',
957 # 'deleted_files', 'new_files', or 'new_or_modified_metadata_files'
958
959 if (!&util::filename_is_absolute($curr_file)) {
960 # add in import dir to make absolute
961 $full_curr_file = &util::filename_cat($importdir,$curr_file);
962 }
963
964 # figure out if new file or not
965 if (defined $full_prev_all_files->{$full_curr_file}) {
966 # delete it so that only files that need deleting are left
967 delete $full_prev_all_files->{$full_curr_file};
968
969 # had it before. is it a metadata file?
970 if ($block_hash->{'metadata_files'}->{$full_curr_file}) {
971
972 # is it modified??
973 if (-M $full_curr_file < $archiveinf_timestamp) {
974 print STDERR "*** Detected a *modified metadata* file: $full_curr_file\n" if $verbosity >= 2;
975 # its newer than last build
976 $block_hash->{'new_or_modified_metadata_files'}->{$full_curr_file} = 1;
977 }
978 }
979 else {
980 if ($incremental_mode eq "all") {
981
982 # had it before
983 $block_hash->{'existing_files'}->{$full_curr_file} = 1;
984
985 }
986 else {
987 # Warning in "onlyadd" mode, but had it before!
988 print STDERR "Warning: File $full_curr_file previously imported.\n";
989 print STDERR " Treating as new file\n";
990
991 $block_hash->{'new_files'}->{$full_curr_file} = 1;
992
993 }
994 }
995 }
996 else {
997 if ($block_hash->{'metadata_files'}->{$full_curr_file}) {
998 # the new file is the special sort of file greenstone uses
999 # to attach metadata to src documents
1000 # i.e metadata.xml
1001 # (but note, the filename used is not constrained in
1002 # Greenstone to always be this)
1003
1004 print STDERR "*** Detected *new* metadata file: $full_curr_file\n" if $verbosity >= 2;
1005 $block_hash->{'new_or_modified_metadata_files'}->{$full_curr_file} = 1;
1006 }
1007 else {
1008 $block_hash->{'new_files'}->{$full_curr_file} = 1;
1009 }
1010 }
1011
1012
1013 delete $block_hash->{'all_files'}->{$curr_file};
1014 }
1015
1016
1017
1018
1019 # Deal with complication of new or modified metadata files by forcing
1020 # everything from this point down in the file hierarchy to
1021 # be freshly imported.
1022 #
1023 # This may mean files that have not changed are reindexed, but does
1024 # guarantee by the end of processing all new metadata is correctly
1025 # associated with the relevant document(s).
1026
1027 foreach my $new_mdf (keys %{$block_hash->{'new_or_modified_metadata_files'}}) {
1028 my ($fileroot,$situated_dir,$ext) = fileparse($new_mdf, "\\.[^\\.]+\$");
1029
1030 $situated_dir =~ s/[\\\/]+$//; # remove tailing slashes
1031 $situated_dir =~ s/\\/\\\\/g; # need to protect windows slash \ in regular expression
1032
1033 # Go through existing_files, and mark anything that is contained
1034 # within 'situated_dir' to be reindexed (in case some of the metadata
1035 # attaches to one of these files)
1036
1037 my $reindex_files = [];
1038
1039 foreach my $existing_f (keys %{$block_hash->{'existing_files'}}) {
1040
1041 if ($existing_f =~ m/^$situated_dir/) {
1042
1043 print STDERR "**** Existing file $existing_f\nis located within\n$situated_dir\n";
1044
1045 push(@$reindex_files,$existing_f);
1046 $block_hash->{'reindex_files'}->{$existing_f} = 1;
1047 delete $block_hash->{'existing_files'}->{$existing_f};
1048
1049 }
1050 }
1051
1052 # metadata file needs to be in new_files list so parsed by MetadataXMLPlug
1053 # (or equivalent)
1054 $block_hash->{'new_files'}->{$new_mdf} = 1;
1055
1056 }
1057
1058 # go through remaining existing files and work out what has changed and needs to be reindexed.
1059 my @existing_files = sort keys %{$block_hash->{'existing_files'}};
1060
1061 my $reindex_files = [];
1062
1063 foreach my $existing_filename (@existing_files) {
1064 if (-M $existing_filename < $archiveinf_timestamp) {
1065 # file is newer than last build
1066
1067 my $existing_file = $existing_filename;
1068 #my $collectdir = &util::filename_cat($ENV{'GSDLCOLLECTDIR'});
1069
1070 #my $collectdir_resafe = &util::filename_to_regex($collectdir);
1071 #$existing_file =~ s/^$collectdir_resafe(\\|\/)?//;
1072
1073 print STDERR "**** Reindexing existing file: $existing_file\n";
1074
1075 push(@$reindex_files,$existing_file);
1076 $block_hash->{'reindex_files'}->{$existing_filename} = 1;
1077 }
1078
1079 }
1080
1081
1082 # By this point full_prev_all_files contains the files
1083 # mentioned in archiveinf-src.db but are not in the 'import'
1084 # folder (or whatever was specified through -importdir ...)
1085
1086 # This list can contain files that were created in the 'tmp' or
1087 # 'cache' areas (such as screen-size and thumbnail images).
1088 #
1089 # In building the final list of files to delete, we test to see if
1090 # it exists on the filesystem and if it does (unusual for a "normal"
1091 # file in import, but possible in the case of 'tmp' files),
1092 # supress it from going into the final list
1093
1094 my $collectdir = $ENV{'GSDLCOLLECTDIR'};
1095
1096 my @deleted_files = values %$full_prev_all_files;
1097 map { my $curr_file = $_;
1098 my $full_curr_file = $curr_file;
1099
1100 if (!&util::filename_is_absolute($curr_file)) {
1101 # add in import dir to make absolute
1102
1103 $full_curr_file = &util::filename_cat($collectdir,$curr_file);
1104 }
1105
1106
1107 if (!-e $full_curr_file) {
1108 $block_hash->{'deleted_files'}->{$curr_file} = 1;
1109 }
1110 } @deleted_files;
1111
1112
1113
1114}
1115
1116
1117# this is used to delete "deleted" docs, and to remove old versions of "changed" docs
1118# $mode is 'delete' or 'reindex'
1119sub mark_docs_for_deletion
1120{
1121 my ($archive_info,$block_hash,$deleted_files,$archivedir,$verbosity,$mode) = @_;
1122
1123 my $mode_text = "deleted from index";
1124 if ($mode eq "reindex") {
1125 $mode_text = "reindexed";
1126 }
1127
1128 # Get the infodbtype value for this collection from the arcinfo object
1129 my $infodbtype = $archive_info->{'infodbtype'};
1130
1131 my $arcinfo_doc_filename = &dbutil::get_infodb_file_path($infodbtype, "archiveinf-doc", $archivedir);
1132 my $arcinfo_src_filename = &dbutil::get_infodb_file_path($infodbtype, "archiveinf-src", $archivedir);
1133
1134
1135 # record files marked for deletion in arcinfo
1136 foreach my $file (@$deleted_files) {
1137 # use 'archiveinf-src' info database file to look up all the OIDs
1138 # that this file is used in (note in most cases, it's just one OID)
1139
1140 my $src_rec = &dbutil::read_infodb_entry($infodbtype, $arcinfo_src_filename, $file);
1141 my $oids = $src_rec->{'oid'};
1142 my $file_record_deleted = 0;
1143
1144 # delete the src record
1145 my $src_infodb_file_handle = &dbutil::open_infodb_write_handle($infodbtype, $arcinfo_src_filename, "append");
1146 &dbutil::delete_infodb_entry($infodbtype, $src_infodb_file_handle, $file);
1147 &dbutil::close_infodb_write_handle($infodbtype, $src_infodb_file_handle);
1148
1149
1150 foreach my $oid (@$oids) {
1151
1152 # find the source doc (the primary file that becomes this oid)
1153 my $doc_rec = &dbutil::read_infodb_entry($infodbtype, $arcinfo_doc_filename, $oid);
1154 my $doc_source_file = $doc_rec->{'src-file'}->[0];
1155 if (!&util::filename_is_absolute($doc_source_file)) {
1156 $doc_source_file = &util::filename_cat($ENV{'GSDLCOLLECTDIR'},$doc_source_file);
1157 }
1158
1159 if ($doc_source_file ne $file) {
1160 # its an associated or metadata file
1161
1162 # mark source doc for reimport as one of its assoc files has changed or deleted
1163 $block_hash->{'reindex_files'}->{$doc_source_file} = 1;
1164
1165 }
1166 my $curr_status = $archive_info->get_status_info($oid);
1167 if (defined($curr_status) && (($curr_status ne "D"))) {
1168 if ($verbosity>1) {
1169 print STDERR "$oid ($doc_source_file) marked to be $mode_text on next buildcol.pl\n";
1170 }
1171 # mark oid for deletion (it will be deleted or reimported)
1172 $archive_info->set_status_info($oid,"D");
1173 my $val = &dbutil::read_infodb_rawentry($infodbtype, $arcinfo_doc_filename, $oid);
1174 $val =~ s/^<index-status>(.*)$/<index-status>D/m;
1175
1176 my $val_rec = &dbutil::convert_infodb_string_to_hash($val);
1177 my $doc_infodb_file_handle = &dbutil::open_infodb_write_handle($infodbtype, $arcinfo_doc_filename, "append");
1178
1179 &dbutil::write_infodb_entry($infodbtype, $doc_infodb_file_handle, $oid, $val_rec);
1180 &dbutil::close_infodb_write_handle($infodbtype, $doc_infodb_file_handle);
1181 }
1182 }
1183
1184 }
1185 # now go through and check that we haven't marked any primary files for reindex (because their associated files have changed/deleted) when they have been deleted themselves. only in delete mode.
1186 if ($mode eq "delete") {
1187 foreach my $file (@$deleted_files) {
1188 if (defined $block_hash->{'reindex_files'}->{$file}) {
1189 delete $block_hash->{'reindex_files'}->{$file};
1190 }
1191 }
1192 }
1193
1194
1195}
1196
1197sub add_dir_contents_to_list {
1198
1199 my ($dirname, $list) = @_;
1200
1201 # Recur over directory contents.
1202 my (@dir, $subfile);
1203
1204 # find all the files in the directory
1205 if (!opendir (DIR, $dirname)) {
1206 print STDERR "inexport: WARNING - couldn't read directory $dirname\n";
1207 return -1; # error in processing
1208 }
1209 @dir = readdir (DIR);
1210 closedir (DIR);
1211
1212 for (my $i = 0; $i < scalar(@dir); $i++) {
1213 my $subfile = $dir[$i];
1214 next if ($subfile =~ m/^\.\.?$/);
1215 next if ($subfile =~ /^\.svn$/);
1216 my $full_file = &util::filename_cat($dirname, $subfile);
1217 if (-d $full_file) {
1218 &add_dir_contents_to_list($full_file, $list);
1219 } else {
1220 push (@$list, $full_file);
1221 }
1222 }
1223
1224}
1225
1226
12271;
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