1 | /*
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2 | * Collection.java
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3 | * Copyright (C) 2002 New Zealand Digital Library, http://www.nzdl.org
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4 | *
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5 | * This program is free software; you can redistribute it and/or modify
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6 | * it under the terms of the GNU General Public License as published by
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7 | * the Free Software Foundation; either version 2 of the License, or
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8 | * (at your option) any later version.
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9 | *
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10 | * This program is distributed in the hope that it will be useful,
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11 | * but WITHOUT ANY WARRANTY; without even the implied warranty of
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12 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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13 | * GNU General Public License for more details.
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14 | *
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15 | * You should have received a copy of the GNU General Public License
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16 | * along with this program; if not, write to the Free Software
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17 | * Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA.
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18 | */
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19 | package org.greenstone.gsdl3.collection;
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20 |
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21 | import java.io.BufferedReader;
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22 | import java.io.BufferedWriter;
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23 | import java.io.File;
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24 | import java.io.FileReader;
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25 | import java.io.FileWriter;
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26 | import java.io.IOException;
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27 | import java.io.PrintWriter;
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28 | import java.io.StringWriter;
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29 | import java.util.ArrayList;
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30 | import java.util.HashMap;
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31 |
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32 | import org.apache.commons.lang3.StringUtils;
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33 | import org.apache.log4j.Logger;
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34 | import org.greenstone.gsdl3.core.ModuleInterface;
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35 | import org.greenstone.gsdl3.service.Authentication;
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36 | import org.greenstone.gsdl3.util.CustomClassLoader;
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37 | import org.greenstone.gsdl3.util.Dictionary;
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38 | import org.greenstone.gsdl3.util.GSFile;
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39 | import org.greenstone.gsdl3.util.GSXML;
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40 | import org.greenstone.gsdl3.util.GSXSLT;
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41 | import org.greenstone.gsdl3.util.OAIXML;
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42 | import org.greenstone.gsdl3.util.SimpleMacroResolver;
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43 | import org.greenstone.gsdl3.util.UserContext;
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44 | import org.greenstone.gsdl3.util.XMLConverter;
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45 | import org.greenstone.gsdl3.util.XMLTransformer;
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46 | import org.w3c.dom.Document;
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47 | import org.w3c.dom.Element;
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48 | import org.w3c.dom.Node;
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49 | import org.w3c.dom.NodeList;
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50 |
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51 | /**
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52 | * Represents a collection in Greenstone. A collection is an extension of a
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53 | * ServiceCluster - it has local data that the services use.
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54 | *
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55 | * @author Katherine Don
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56 | * @see ModuleInterface
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57 | */
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58 | public class Collection extends ServiceCluster
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59 | {
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60 |
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61 | static Logger logger = Logger.getLogger(org.greenstone.gsdl3.collection.Collection.class.getName());
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62 |
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63 | /** is this collection being tidied and therefore can support realistic book view? */
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64 | protected boolean useBook = false;
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65 | /**
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66 | * is this collection public or private - public collections will
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67 | * appear on the home page, whereas private collections won't
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68 | */
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69 | protected boolean is_public = true;
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70 | /** collection type : mg, mgpp or lucene */
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71 | protected String col_type = "";
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72 | /** database type : gdbm, jdbm or sqlite */
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73 | protected String db_type = "";
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74 | /** time when this collection was built Used by RSS */
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75 | protected long lastmodified = 0;
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76 | /** earliestDatestamp of this collection. Used by RSS. No longer used as fallback by OAI */
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77 | protected long earliestDatestamp = 0;
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78 |
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79 | /** Stores the default accessibility of guest users */
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80 | protected boolean _publicAccess = true;
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81 | /** Stores the scope of any security rules (either collection or document) */
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82 | protected boolean _securityScopeCollection = true;
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83 | protected String _humanVerify = null;
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84 | protected boolean _useRecaptcha = false; // for human verify
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85 | protected String _siteKey = null; // for recaptcha
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86 | protected String _secretKey = null; // for recaptcha
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87 |
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88 | protected HashMap<String, ArrayList<Element>> _documentSets = new HashMap<String, ArrayList<Element>>();
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89 | protected ArrayList<HashMap<String, ArrayList<String>>> _securityExceptions = new ArrayList<HashMap<String, ArrayList<String>>>();
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90 |
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91 | protected HashMap<String, Element> _ccServiceFormats = new HashMap<String, Element>();
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92 | protected XMLTransformer transformer = null;
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93 |
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94 | /** same as setClusterName */
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95 | public void setCollectionName(String name)
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96 | {
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97 | setClusterName(name);
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98 | }
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99 |
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100 | public Collection()
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101 | {
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102 | super();
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103 | this.description = this.desc_doc.createElement(GSXML.COLLECTION_ELEM);
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104 | }
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105 |
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106 | /**
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107 | * Configures the collection.
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108 | *
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109 | * gsdlHome and collectionName must be set before configure is called.
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110 | *
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111 | * the file buildcfg.xml is located in gsdlHome/collect/collectionName
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112 | * collection metadata is obtained, and services loaded.
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113 | *
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114 | * @return true/false on success/fail
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115 | */
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116 | public boolean configure()
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117 | {
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118 | if (this.site_home == null || this.cluster_name == null)
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119 | {
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120 | logger.error("Collection: site_home and collection_name must be set before configure called!");
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121 | return false;
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122 | }
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123 | // set up the class loader
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124 | this.class_loader = new CustomClassLoader(this.getClass().getClassLoader(), GSFile.collectionResourceDir(this.site_home, this.cluster_name));
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125 |
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126 | macro_resolver.addMacro("_httpcollection_", this.site_http_address + "/collect/" + this.cluster_name);
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127 |
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128 | Element coll_config_xml = loadCollConfigFile();
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129 | if (coll_config_xml == null) {
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130 | logger.error("Collection: couldn't configure collection: " + this.cluster_name + ", " + "Couldn't load collection config file");
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131 |
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132 | return false;
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133 | }
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134 | Element build_config_xml = loadBuildConfigFile();
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135 |
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136 | if (build_config_xml == null)
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137 | {
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138 | logger.error("Collection: couldn't configure collection: " + this.cluster_name + ", " + "Couldn't load build config file");
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139 |
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140 | return false;
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141 | }
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142 |
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143 | GSXSLT.modifyCollectionConfigForDebug(coll_config_xml);
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144 | // get the collection type attribute
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145 | Element search = (Element) GSXML.getChildByTagName(coll_config_xml, GSXML.SEARCH_ELEM);
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146 | if (search != null)
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147 | {
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148 | col_type = search.getAttribute(GSXML.TYPE_ATT);
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149 | }
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150 |
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151 | Element browse = (Element) GSXML.getChildByTagName(coll_config_xml, GSXML.INFODB_ELEM);
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152 | if (browse != null)
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153 | {
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154 | db_type = browse.getAttribute(GSXML.TYPE_ATT);
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155 | }
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156 | else
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157 | {
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158 | db_type = "gdbm"; //Default database type
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159 | }
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160 |
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161 | this.description.setAttribute(GSXML.TYPE_ATT, col_type);
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162 | this.description.setAttribute(GSXML.DB_TYPE_ATT, db_type);
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163 |
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164 | // process the metadata and display items and default library params
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165 | super.configureLocalData(coll_config_xml);
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166 | super.configureLocalData(build_config_xml);
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167 |
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168 | // get extra collection specific stuff
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169 | _globalFormat = (Element) GSXML.getChildByTagName(coll_config_xml, GSXML.FORMAT_ELEM);
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170 | loadCCServiceFormats(coll_config_xml);
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171 |
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172 | findAndLoadInfo(coll_config_xml, build_config_xml);
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173 |
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174 | loadSecurityInformation(coll_config_xml);
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175 |
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176 | // do we have archives folder?
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177 | File archives_folder = new File(GSFile.collectionArchiveDir(this.site_home, this.cluster_name));
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178 | if (!archives_folder.exists()) {
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179 | this.description.setAttribute(GSXML.NO_ARCHIVES_ATT, "true");
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180 | }
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181 | // now do the services
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182 | configureServiceRacks(coll_config_xml, build_config_xml);
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183 |
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184 | return true;
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185 |
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186 | }
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187 |
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188 | public boolean useBook()
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189 | {
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190 | return useBook;
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191 | }
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192 |
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193 | public boolean isPublic()
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194 | {
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195 | return is_public;
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196 | }
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197 |
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198 | // Used by RSSRetrieve. No longer used by OAI Receptionist (as second fallback)
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199 | public long getLastmodified()
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200 | {
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201 | return lastmodified;
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202 | }
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203 |
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204 | // used by RSSRetrieve, no longer used as fallback by the OAIReceptionist
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205 | public long getEarliestDatestamp()
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206 | {
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207 | return earliestDatestamp;
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208 | }
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209 |
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210 | /**
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211 | * load in the collection config file into a DOM Element
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212 | */
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213 | protected Element loadCollConfigFile()
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214 | {
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215 |
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216 | File coll_config_file = new File(GSFile.collectionConfigFile(this.site_home, this.cluster_name));
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217 |
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218 | if (!coll_config_file.exists())
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219 | {
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220 | logger.error("@@@ File " + coll_config_file + " did not exist. Can't load it in");
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221 | return null;
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222 | }
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223 | // get the xml
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224 | Document coll_config_doc = this.converter.getDOM(coll_config_file, CONFIG_ENCODING);
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225 | Element coll_config_elem = null;
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226 | if (coll_config_doc != null)
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227 | {
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228 | coll_config_elem = coll_config_doc.getDocumentElement();
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229 | }
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230 | return coll_config_elem;
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231 |
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232 | }
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233 |
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234 | /**
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235 | * load in the collection build config file into a DOM Element
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236 | */
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237 | protected Element loadBuildConfigFile()
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238 | {
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239 | File build_config_file = new File(GSFile.collectionBuildConfigFile(this.site_home, this.cluster_name));
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240 | if (!build_config_file.exists())
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241 | {
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242 | logger.error("Collection: couldn't configure collection: " + this.cluster_name + ", " + build_config_file + " does not exist");
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243 | return null;
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244 | }
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245 | Document build_config_doc = this.converter.getDOM(build_config_file, CONFIG_ENCODING);
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246 | Element build_config_elem = null;
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247 | if (build_config_doc != null)
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248 | {
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249 | build_config_elem = build_config_doc.getDocumentElement();
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250 | }
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251 |
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252 | lastmodified = build_config_file.lastModified();
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253 |
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254 | return build_config_elem;
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255 | }
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256 |
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257 | /**
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258 | * find the metadata and display elems from the two config files and add it
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259 | * to the appropriate lists
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260 | */
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261 | protected boolean findAndLoadInfo(Element coll_config_xml, Element build_config_xml)
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262 | {
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263 | addMetadata("httpPath", this.site_http_address + "/collect/" + this.cluster_name);
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264 |
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265 |
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266 | //check whether the html are tidy or not
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267 | Element import_list = (Element) GSXML.getChildByTagName(coll_config_xml, GSXML.IMPORT_ELEM);
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268 | if (import_list != null)
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269 | {
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270 | Element plugin_list = (Element) GSXML.getChildByTagName(import_list, GSXML.PLUGIN_ELEM + GSXML.LIST_MODIFIER);
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271 | //addPlugins(plugin_list);
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272 | if (plugin_list != null)
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273 | {
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274 | Element plugin_elem = (Element) GSXML.getNamedElement(plugin_list, GSXML.PLUGIN_ELEM, GSXML.NAME_ATT, "HTMLPlugin");
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275 | if (plugin_elem != null)
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276 | {
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277 | //get the option
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278 | Element option_elem = (Element) GSXML.getNamedElement(plugin_elem, GSXML.PARAM_OPTION_ELEM, GSXML.NAME_ATT, "-use_realistic_book");
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279 | if (option_elem != null)
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280 | {
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281 | useBook = true;
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282 | }
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283 | }
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284 | }
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285 | }
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286 | String tidy = (useBook == true ? "tidy" : "untidy");
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287 | addMetadata("tidyoption", tidy);
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288 |
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289 |
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290 | if (this.metadata_list != null)
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291 | {
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292 | // check whether we are public or not
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293 | Element meta_elem = (Element) GSXML.getNamedElement(this.metadata_list, GSXML.METADATA_ELEM, GSXML.NAME_ATT, "public");
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294 | if (meta_elem != null)
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295 | {
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296 | String value = GSXML.getValue(meta_elem).toLowerCase().trim();
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297 | if (value.equals("false"))
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298 | {
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299 | is_public = false;
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300 | }
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301 | }
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302 | // earliest datestamp is the time the collection was created.
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303 | meta_elem = (Element) GSXML.getNamedElement(this.metadata_list, GSXML.METADATA_ELEM, GSXML.NAME_ATT, OAIXML.EARLIEST_DATESTAMP);
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304 | if (meta_elem != null) {
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305 | String earliestDatestampStr = GSXML.getValue(meta_elem);
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306 | if (!earliestDatestampStr.equals("")) {
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307 | earliestDatestamp = Long.parseLong(earliestDatestampStr) * 1000; // stored in seconds, convert to milliseconds
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308 | }
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309 | }
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310 |
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311 | }
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312 | return true;
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313 | }
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314 |
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315 | protected void loadCCServiceFormats(Element coll_config_xml) {
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316 |
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317 | Element ccservice = (Element)GSXML.getChildByTagName(coll_config_xml, GSXML.CC_SERVICES_ELEM);
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318 | if (ccservice == null) return;
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319 | NodeList format_elems = GSXML.getChildrenByTagName(ccservice, GSXML.FORMAT_ELEM);
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320 | for (int i = 0; i < format_elems.getLength(); i++)
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321 | {
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322 | Element child = (Element)format_elems.item(i);
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323 | String service_name = child.getAttribute(GSXML.SERVICE_ATT);
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324 | if (!service_name.equals("")) {
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325 | _ccServiceFormats.put(service_name, child);
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326 | }
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327 | }
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328 | }
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329 | protected void loadSecurityInformation(Element coll_config_xml)
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330 | {
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331 | Element securityBlock = (Element) GSXML.getChildByTagName(coll_config_xml, GSXML.SECURITY_ELEM);
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332 |
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333 | if (securityBlock == null)
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334 | {
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335 | return;
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336 | }
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337 |
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338 | String disabled = securityBlock.getAttribute(GSXML.DISABLED_ATT);
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339 | if (!disabled.equals("")) {
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340 | // security block has been disabled.
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341 | logger.warn("Security block has been disabled. Not implementing any security for collection "+this.cluster_name);
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342 | return;
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343 | }
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344 | String scope = securityBlock.getAttribute(GSXML.SCOPE_ATT);
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345 | String defaultAccess = securityBlock.getAttribute(GSXML.DEFAULT_ACCESS_ATT);
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346 |
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347 | if (defaultAccess.toLowerCase().equals(GSXML.ACCESS_PUBLIC))
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348 | {
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349 | _publicAccess = true;
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350 | }
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351 | else if (defaultAccess.toLowerCase().equals(GSXML.ACCESS_PRIVATE))
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352 | {
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353 | _publicAccess = false;
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354 | }
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355 | else
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356 | {
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357 | logger.warn("Default access for collection " + this.cluster_name + " is neither public nor private, assuming public");
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358 | }
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359 |
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360 | String humanVerify = securityBlock.getAttribute(GSXML.VERIFY_ATT);
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361 | if (!humanVerify.equals("") && !humanVerify.equals("false")) {
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362 | _humanVerify = humanVerify;
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363 | }
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364 |
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365 | String useRecaptcha = securityBlock.getAttribute(GSXML.USE_RECAPTCHA_ATT);
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366 | if (useRecaptcha.equals("true")) {
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367 |
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368 | Authentication authen_services =(Authentication) this.router.getModuleMap().get(Authentication.AUTHENTICATION_SERVICE);
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369 | if (authen_services != null) {
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370 | String siteKey = authen_services.getRecaptchaSiteKey();
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371 | String secretKey = authen_services.getRecaptchaSecretKey();
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372 |
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373 | if (siteKey != null && secretKey != null) {
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374 | _useRecaptcha = true;
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375 | _siteKey = siteKey;
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376 | _secretKey = secretKey;
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377 | } else {
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378 | logger.warn("use_recaptcha was set to true, but couldn't find recaptcha site and secret keys from the siteConfig Authentication service. Setting use_recaptcha to false!");
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379 | }
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380 | }
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381 | }
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382 | if (scope.toLowerCase().equals(GSXML.SCOPE_COLLECTION))
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383 | {
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384 | _securityScopeCollection = true;
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385 | }
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386 | else if (scope.toLowerCase().equals(GSXML.SCOPE_DOCUMENT))
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387 | {
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388 | _securityScopeCollection = false;
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389 | }
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390 | else
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391 | {
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392 | logger.warn("Security scope is neither collection nor document, assuming collection");
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393 | }
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394 |
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395 | NodeList exceptions = GSXML.getChildrenByTagName(securityBlock, GSXML.EXCEPTION_ELEM);
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396 |
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397 | if (exceptions.getLength() > 0)
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398 | {
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399 | if (!_securityScopeCollection)
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400 | {
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401 | NodeList documentSetElems = GSXML.getChildrenByTagName(securityBlock, GSXML.DOCUMENT_SET_ELEM);
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402 | for (int i = 0; i < documentSetElems.getLength(); i++)
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403 | {
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404 | Element documentSet = (Element) documentSetElems.item(i);
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405 | String setName = documentSet.getAttribute(GSXML.NAME_ATT);
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406 | NodeList matchStatements = GSXML.getChildrenByTagName(documentSet, GSXML.MATCH_ELEM);
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407 | ArrayList<Element> matchStatementList = new ArrayList<Element>();
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408 | for (int j = 0; j < matchStatements.getLength(); j++)
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409 | {
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410 | matchStatementList.add((Element) matchStatements.item(j));
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411 | }
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412 | _documentSets.put(setName, matchStatementList);
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413 | }
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414 | }
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415 |
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416 | for (int i = 0; i < exceptions.getLength(); i++)
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417 | {
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418 | HashMap<String, ArrayList<String>> securityException = new HashMap<String, ArrayList<String>>();
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419 | ArrayList<String> exceptionGroups = new ArrayList<String>();
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420 | ArrayList<String> exceptionSets = new ArrayList<String>();
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421 |
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422 | Element exception = (Element) exceptions.item(i);
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423 | NodeList groups = GSXML.getChildrenByTagName(exception, GSXML.GROUP_ELEM);
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424 | for (int j = 0; j < groups.getLength(); j++)
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425 | {
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426 | Element group = (Element) groups.item(j);
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427 | String groupName = group.getAttribute(GSXML.NAME_ATT);
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428 | exceptionGroups.add(groupName);
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429 | }
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430 | NodeList docSets = GSXML.getChildrenByTagName(exception, GSXML.DOCUMENT_SET_ELEM);
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431 | for (int j = 0; j < docSets.getLength(); j++)
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432 | {
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433 | Element docSet = (Element) docSets.item(j);
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434 | String docSetName = docSet.getAttribute(GSXML.NAME_ATT);
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435 | exceptionSets.add(docSetName);
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436 | }
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437 | if (_securityScopeCollection) {
|
---|
438 | // we don't add in any exceptions that have document sets
|
---|
439 | if (!exceptionSets.isEmpty()) {
|
---|
440 | continue;
|
---|
441 | }
|
---|
442 | }
|
---|
443 | securityException.put("groups", exceptionGroups);
|
---|
444 | securityException.put("sets", exceptionSets);
|
---|
445 | _securityExceptions.add(securityException);
|
---|
446 | }
|
---|
447 | }
|
---|
448 | }
|
---|
449 |
|
---|
450 | protected boolean configureServiceRacks(Element coll_config_xml, Element build_config_xml)
|
---|
451 | {
|
---|
452 | clearServices();
|
---|
453 | Element service_list = (Element) GSXML.getChildByTagName(build_config_xml, GSXML.SERVICE_CLASS_ELEM + GSXML.LIST_MODIFIER);
|
---|
454 | if (service_list != null)
|
---|
455 | {
|
---|
456 | configureServiceRackList(service_list, coll_config_xml);
|
---|
457 | }
|
---|
458 | // collection Config may also contain manually added service racks
|
---|
459 | service_list = (Element) GSXML.getChildByTagName(coll_config_xml, GSXML.SERVICE_CLASS_ELEM + GSXML.LIST_MODIFIER);
|
---|
460 | if (service_list != null)
|
---|
461 | {
|
---|
462 | configureServiceRackList(service_list, build_config_xml);
|
---|
463 | }
|
---|
464 | return true;
|
---|
465 | }
|
---|
466 |
|
---|
467 | /**
|
---|
468 | * do a configure on only part of the collection
|
---|
469 | */
|
---|
470 | protected boolean configureSubset(String subset)
|
---|
471 | {
|
---|
472 |
|
---|
473 | // need the coll config files
|
---|
474 | Element coll_config_elem = loadCollConfigFile();
|
---|
475 | Element build_config_elem = loadBuildConfigFile();
|
---|
476 | if (coll_config_elem == null || build_config_elem == null)
|
---|
477 | {
|
---|
478 | // wont be able to do any of the requests
|
---|
479 | return false;
|
---|
480 | }
|
---|
481 |
|
---|
482 | if (subset.equals(GSXML.SERVICE_ELEM + GSXML.LIST_MODIFIER))
|
---|
483 | {
|
---|
484 | return configureServiceRacks(coll_config_elem, build_config_elem);
|
---|
485 | }
|
---|
486 |
|
---|
487 | if (subset.equals(GSXML.METADATA_ELEM + GSXML.LIST_MODIFIER) || subset.equals(GSXML.DISPLAY_TEXT_ELEM + GSXML.LIST_MODIFIER) || subset.equals(GSXML.LIBRARY_PARAM_ELEM+GSXML.LIST_MODIFIER))
|
---|
488 | {
|
---|
489 | configureLocalData(coll_config_elem);
|
---|
490 | configureLocalData(build_config_elem);
|
---|
491 | return findAndLoadInfo(coll_config_elem, build_config_elem);
|
---|
492 |
|
---|
493 | }
|
---|
494 |
|
---|
495 | logger.error("Collection: cant process system request, configure " + subset);
|
---|
496 | return false;
|
---|
497 | }
|
---|
498 |
|
---|
499 | /**
|
---|
500 | * handles requests made to the ServiceCluster itself
|
---|
501 | *
|
---|
502 | * @param req
|
---|
503 | * - the request Element- <request>
|
---|
504 | * @return the result Element - should be <response>
|
---|
505 | */
|
---|
506 | protected Element processMessage(Document result_doc, Element request)
|
---|
507 | {
|
---|
508 | String type = request.getAttribute(GSXML.TYPE_ATT);
|
---|
509 |
|
---|
510 | if (type.equals(GSXML.REQUEST_TYPE_FORMAT_STRING))
|
---|
511 | {
|
---|
512 | return processFormatStringRequest(result_doc, request);
|
---|
513 | }
|
---|
514 | else if (type.equals(GSXML.REQUEST_TYPE_SECURITY))
|
---|
515 | {
|
---|
516 | return processSecurityRequest(result_doc, request);
|
---|
517 | }
|
---|
518 | else if (type.equals(GSXML.REQUEST_TYPE_FORMAT))
|
---|
519 | {
|
---|
520 | Element response = result_doc.createElement(GSXML.RESPONSE_ELEM);
|
---|
521 | response.setAttribute(GSXML.FROM_ATT, this.cluster_name);
|
---|
522 | response.setAttribute(GSXML.TYPE_ATT, GSXML.REQUEST_TYPE_FORMAT);
|
---|
523 |
|
---|
524 | // if we have a service arg, return format for that service - if any
|
---|
525 | String service_name = request.getAttribute(GSXML.SERVICE_ATT);
|
---|
526 | if (!service_name.equals("")) {
|
---|
527 | Element this_format = _ccServiceFormats.get(service_name);
|
---|
528 | if (this_format != null) {
|
---|
529 | response.appendChild(result_doc.importNode(this_format, true));
|
---|
530 | }
|
---|
531 | return response; // if a service_name was specified, return
|
---|
532 | // the format, or empty response
|
---|
533 | }
|
---|
534 |
|
---|
535 | // no service_name specified, return global format
|
---|
536 | if (_globalFormat != null)
|
---|
537 | {
|
---|
538 | response.appendChild(result_doc.importNode(_globalFormat, true));
|
---|
539 | }
|
---|
540 | return response;
|
---|
541 | }
|
---|
542 | // unknown type
|
---|
543 | return super.processMessage(result_doc, request);
|
---|
544 |
|
---|
545 | }
|
---|
546 |
|
---|
547 | protected Element processSecurityRequest(Document result_doc, Element request)
|
---|
548 | {
|
---|
549 | Element response = result_doc.createElement(GSXML.RESPONSE_ELEM);
|
---|
550 | response.setAttribute(GSXML.FROM_ATT, this.cluster_name);
|
---|
551 | response.setAttribute(GSXML.TYPE_ATT, GSXML.REQUEST_TYPE_SECURITY);
|
---|
552 |
|
---|
553 | if (_humanVerify != null) {
|
---|
554 | response.setAttribute(GSXML.VERIFY_ATT, _humanVerify);
|
---|
555 | if (_useRecaptcha) {
|
---|
556 | response.setAttribute(GSXML.SITE_KEY_ATT, _siteKey);
|
---|
557 | response.setAttribute(GSXML.SECRET_KEY_ATT, _secretKey);
|
---|
558 | }
|
---|
559 | }
|
---|
560 | String oid = request.getAttribute("oid");
|
---|
561 | if (oid.contains("."))
|
---|
562 | {
|
---|
563 | oid = oid.substring(0, oid.indexOf("."));
|
---|
564 | }
|
---|
565 |
|
---|
566 | ArrayList<String> groups = getPermittedGroups(oid);
|
---|
567 |
|
---|
568 | Element groupList = result_doc.createElement(GSXML.GROUP_ELEM + GSXML.LIST_MODIFIER);
|
---|
569 | response.appendChild(groupList);
|
---|
570 |
|
---|
571 | for (String groupName : groups)
|
---|
572 | {
|
---|
573 | Element group = result_doc.createElement(GSXML.GROUP_ELEM);
|
---|
574 | groupList.appendChild(group);
|
---|
575 | group.setAttribute(GSXML.NAME_ATT, groupName);
|
---|
576 | }
|
---|
577 | return response;
|
---|
578 | }
|
---|
579 |
|
---|
580 | protected ArrayList<String> getPermittedGroups(String oid)
|
---|
581 | {
|
---|
582 | ArrayList<String> groups = new ArrayList<String>();
|
---|
583 |
|
---|
584 | if (_securityScopeCollection)
|
---|
585 | {
|
---|
586 | if (_publicAccess)
|
---|
587 | {
|
---|
588 | groups.add("");
|
---|
589 | }
|
---|
590 | else
|
---|
591 | {
|
---|
592 | for (HashMap<String, ArrayList<String>> exception : _securityExceptions)
|
---|
593 | {
|
---|
594 | for (String group : exception.get("groups"))
|
---|
595 | {
|
---|
596 | groups.add(group);
|
---|
597 | }
|
---|
598 | }
|
---|
599 | }
|
---|
600 | }
|
---|
601 | else
|
---|
602 | {
|
---|
603 | if (oid != null && !oid.equals(""))
|
---|
604 | {
|
---|
605 | boolean inSet = false;
|
---|
606 | for (HashMap<String, ArrayList<String>> exception : _securityExceptions) {
|
---|
607 |
|
---|
608 | ArrayList<String> exceptionSets = exception.get("sets");
|
---|
609 | if (exceptionSets.size() == 0) {
|
---|
610 | inSet = true;
|
---|
611 | for (String group : exception.get("groups"))
|
---|
612 | {
|
---|
613 | groups.add(group);
|
---|
614 | }
|
---|
615 | }
|
---|
616 | else {
|
---|
617 | for (String setName : exception.get("sets"))
|
---|
618 | {
|
---|
619 | if (documentIsInSet(oid, setName))
|
---|
620 | {
|
---|
621 | inSet = true;
|
---|
622 | for (String group : exception.get("groups"))
|
---|
623 | {
|
---|
624 | groups.add(group);
|
---|
625 | }
|
---|
626 | break;
|
---|
627 | }
|
---|
628 | }
|
---|
629 | }
|
---|
630 | }
|
---|
631 |
|
---|
632 |
|
---|
633 |
|
---|
634 | if (!inSet && _publicAccess)
|
---|
635 | {// our doc was not part of any exception, so it must be public
|
---|
636 | groups.add("");
|
---|
637 | }
|
---|
638 | }
|
---|
639 | else // if we are not doing a request with an oid, then free to access
|
---|
640 | {
|
---|
641 | groups.add("");
|
---|
642 | }
|
---|
643 | }
|
---|
644 |
|
---|
645 | return groups;
|
---|
646 | }
|
---|
647 |
|
---|
648 | protected boolean documentIsInSet(String oid, String setName)
|
---|
649 | {
|
---|
650 | ArrayList<Element> matchStatements = _documentSets.get(setName);
|
---|
651 | if (matchStatements == null || matchStatements.size() == 0)
|
---|
652 | {
|
---|
653 | return false;
|
---|
654 | }
|
---|
655 |
|
---|
656 | for (Element currentMatchStatement : matchStatements)
|
---|
657 | {
|
---|
658 | String fieldName = currentMatchStatement.getAttribute(GSXML.FIELD_ATT);
|
---|
659 | if (fieldName == null || fieldName.equals(""))
|
---|
660 | {
|
---|
661 | fieldName = "oid";
|
---|
662 | }
|
---|
663 |
|
---|
664 | String type = currentMatchStatement.getAttribute(GSXML.TYPE_ATT);
|
---|
665 | if (type == null || type.equals(""))
|
---|
666 | {
|
---|
667 | type = "match";
|
---|
668 | }
|
---|
669 |
|
---|
670 | //String fieldValue = "";
|
---|
671 | String[] fieldValues = null;
|
---|
672 | if (!fieldName.equals("oid"))
|
---|
673 | {
|
---|
674 | //fieldValue = getFieldValue(oid, fieldName);
|
---|
675 | fieldValues = getFieldValues(oid, fieldName);
|
---|
676 | if (fieldValues == null)
|
---|
677 | {
|
---|
678 | return false;
|
---|
679 | }
|
---|
680 | }
|
---|
681 | else
|
---|
682 | {
|
---|
683 | //fieldValue = oid;
|
---|
684 | //fieldValues = new String[0];
|
---|
685 | //fieldValues[0] = oid;
|
---|
686 | fieldValues = new String[]{oid}; // not allowed to do fieldValues = {oid}; after SEPARATE declaration.
|
---|
687 | }
|
---|
688 |
|
---|
689 | String matchValue = GSXML.getNodeText(currentMatchStatement);
|
---|
690 | if (type.equals("match"))
|
---|
691 | {
|
---|
692 |
|
---|
693 | for(int i = 0; i < fieldValues.length; i++) {
|
---|
694 | String fieldValue = fieldValues[i];
|
---|
695 | if (matchValue.equals(fieldValue))
|
---|
696 | {
|
---|
697 | return true;
|
---|
698 | }
|
---|
699 | }
|
---|
700 | }
|
---|
701 | else if (type.equals("regex"))
|
---|
702 | {
|
---|
703 | for(int i = 0; i < fieldValues.length; i++) {
|
---|
704 | String fieldValue = fieldValues[i];
|
---|
705 | if (fieldValue.matches(matchValue))
|
---|
706 | {
|
---|
707 | return true;
|
---|
708 | }
|
---|
709 | }
|
---|
710 | }
|
---|
711 | else
|
---|
712 | {
|
---|
713 | logger.warn("Unknown type of match specified in security block of collection " + this.cluster_name + ".");
|
---|
714 | }
|
---|
715 | }
|
---|
716 |
|
---|
717 | return false;
|
---|
718 | }
|
---|
719 |
|
---|
720 | protected String old_getFieldValue(String oid, String fieldName)
|
---|
721 | {
|
---|
722 | Document msg_doc = XMLConverter.newDOM();
|
---|
723 | Element metadataMessage = msg_doc.createElement(GSXML.MESSAGE_ELEM);
|
---|
724 | Element metadataRequest = GSXML.createBasicRequest(msg_doc, GSXML.REQUEST_TYPE_PROCESS, this.cluster_name + "/DocumentMetadataRetrieve", new UserContext());
|
---|
725 | metadataMessage.appendChild(metadataRequest);
|
---|
726 |
|
---|
727 | Element paramList = msg_doc.createElement(GSXML.PARAM_ELEM + GSXML.LIST_MODIFIER);
|
---|
728 | metadataRequest.appendChild(paramList);
|
---|
729 |
|
---|
730 | Element param = msg_doc.createElement(GSXML.PARAM_ELEM);
|
---|
731 | paramList.appendChild(param);
|
---|
732 |
|
---|
733 | param.setAttribute(GSXML.NAME_ATT, "metadata");
|
---|
734 | param.setAttribute(GSXML.VALUE_ATT, fieldName);
|
---|
735 |
|
---|
736 | Element docList = msg_doc.createElement(GSXML.DOC_NODE_ELEM + GSXML.LIST_MODIFIER);
|
---|
737 | metadataRequest.appendChild(docList);
|
---|
738 |
|
---|
739 | Element doc = msg_doc.createElement(GSXML.DOC_NODE_ELEM);
|
---|
740 | docList.appendChild(doc);
|
---|
741 |
|
---|
742 | doc.setAttribute(GSXML.NODE_ID_ATT, oid);
|
---|
743 |
|
---|
744 | Element response = (Element) this.router.process(metadataMessage);
|
---|
745 | NodeList metadataElems = response.getElementsByTagName(GSXML.METADATA_ELEM);
|
---|
746 |
|
---|
747 | if (metadataElems.getLength() > 0)
|
---|
748 | {
|
---|
749 | Element metadata = (Element) metadataElems.item(0);
|
---|
750 | return GSXML.getNodeText(metadata);
|
---|
751 | }
|
---|
752 |
|
---|
753 | return null;
|
---|
754 | }
|
---|
755 |
|
---|
756 | protected String[] getFieldValues(String oid, String fieldName)
|
---|
757 | {
|
---|
758 | Document msg_doc = XMLConverter.newDOM();
|
---|
759 | Element metadataMessage = msg_doc.createElement(GSXML.MESSAGE_ELEM);
|
---|
760 | Element metadataRequest = GSXML.createBasicRequest(msg_doc, GSXML.REQUEST_TYPE_PROCESS, this.cluster_name + "/DocumentMetadataRetrieve", new UserContext());
|
---|
761 | metadataMessage.appendChild(metadataRequest);
|
---|
762 |
|
---|
763 | Element paramList = msg_doc.createElement(GSXML.PARAM_ELEM + GSXML.LIST_MODIFIER);
|
---|
764 | metadataRequest.appendChild(paramList);
|
---|
765 |
|
---|
766 | Element param = msg_doc.createElement(GSXML.PARAM_ELEM);
|
---|
767 | paramList.appendChild(param);
|
---|
768 |
|
---|
769 | param.setAttribute(GSXML.NAME_ATT, "metadata");
|
---|
770 | param.setAttribute(GSXML.VALUE_ATT, fieldName);
|
---|
771 |
|
---|
772 | Element docList = msg_doc.createElement(GSXML.DOC_NODE_ELEM + GSXML.LIST_MODIFIER);
|
---|
773 | metadataRequest.appendChild(docList);
|
---|
774 |
|
---|
775 | Element doc = msg_doc.createElement(GSXML.DOC_NODE_ELEM);
|
---|
776 | docList.appendChild(doc);
|
---|
777 |
|
---|
778 | doc.setAttribute(GSXML.NODE_ID_ATT, oid);
|
---|
779 |
|
---|
780 | Element response = (Element) this.router.process(metadataMessage);
|
---|
781 | NodeList metadataElems = response.getElementsByTagName(GSXML.METADATA_ELEM);
|
---|
782 |
|
---|
783 | if (metadataElems.getLength() <= 0) {
|
---|
784 | return null;
|
---|
785 | }
|
---|
786 | // else
|
---|
787 | String[] fieldValues = new String[metadataElems.getLength()];
|
---|
788 | for(int i = 0; i < metadataElems.getLength(); i++)
|
---|
789 | {
|
---|
790 | Element metadata = (Element) metadataElems.item(i);
|
---|
791 | fieldValues[i] = GSXML.getNodeText(metadata);
|
---|
792 | }
|
---|
793 |
|
---|
794 | return fieldValues;
|
---|
795 |
|
---|
796 | }
|
---|
797 |
|
---|
798 | protected Element processFormatStringRequest(Document result_doc, Element request)
|
---|
799 | {
|
---|
800 | Element response = result_doc.createElement(GSXML.RESPONSE_ELEM);
|
---|
801 | response.setAttribute(GSXML.TYPE_ATT, GSXML.REQUEST_TYPE_FORMAT_STRING);
|
---|
802 | response.setAttribute(GSXML.FROM_ATT, this.cluster_name);
|
---|
803 |
|
---|
804 | String subaction = request.getAttribute("subaction");
|
---|
805 | String service = request.getAttribute("service");
|
---|
806 |
|
---|
807 | String classifier = null;
|
---|
808 | if (service.equals("ClassifierBrowse"))
|
---|
809 | {
|
---|
810 | classifier = request.getAttribute("classifier");
|
---|
811 | }
|
---|
812 |
|
---|
813 | // check for version file
|
---|
814 | String directory = new File(GSFile.collectionConfigFile(this.site_home, this.cluster_name)).getParent() + File.separator;
|
---|
815 |
|
---|
816 | String version_filename = "";
|
---|
817 | if (service.equals("ClassifierBrowse"))
|
---|
818 | version_filename = directory + "browse_" + classifier + "_format_statement_version.txt";
|
---|
819 | else
|
---|
820 | version_filename = directory + "query_format_statement_version.txt";
|
---|
821 |
|
---|
822 | File version_file = new File(version_filename);
|
---|
823 |
|
---|
824 | if (subaction.equals("update"))
|
---|
825 | {
|
---|
826 | Element format_element = (Element) GSXML.getChildByTagName(request, GSXML.FORMAT_STRING_ELEM);
|
---|
827 | //String format_string = GSXML.getNodeText(format_element);
|
---|
828 | Element format_statement = (Element) format_element.getFirstChild();
|
---|
829 |
|
---|
830 | String version_number = "1";
|
---|
831 | BufferedWriter writer;
|
---|
832 |
|
---|
833 | try
|
---|
834 | {
|
---|
835 |
|
---|
836 | if (version_file.exists())
|
---|
837 | {
|
---|
838 | // Read version
|
---|
839 | BufferedReader reader = new BufferedReader(new FileReader(version_filename));
|
---|
840 | version_number = reader.readLine();
|
---|
841 | int aInt = Integer.parseInt(version_number) + 1;
|
---|
842 | version_number = Integer.toString(aInt);
|
---|
843 | reader.close();
|
---|
844 | }
|
---|
845 | else
|
---|
846 | {
|
---|
847 | // Create
|
---|
848 | version_file.createNewFile();
|
---|
849 | writer = new BufferedWriter(new FileWriter(version_filename));
|
---|
850 | writer.write(version_number);
|
---|
851 | writer.close();
|
---|
852 | }
|
---|
853 |
|
---|
854 | // Write version file
|
---|
855 | String format_statement_filename = "";
|
---|
856 |
|
---|
857 | if (service.equals("ClassifierBrowse"))
|
---|
858 | format_statement_filename = directory + "browse_" + classifier + "_format_statement_v" + version_number + ".txt";
|
---|
859 | else
|
---|
860 | format_statement_filename = directory + "query_format_statement_v" + version_number + ".txt";
|
---|
861 |
|
---|
862 | // Write format statement
|
---|
863 | String format_string = this.converter.getString(format_statement); //GSXML.xmlNodeToString(format_statement);
|
---|
864 | writer = new BufferedWriter(new FileWriter(format_statement_filename));
|
---|
865 | writer.write(format_string);
|
---|
866 | writer.close();
|
---|
867 |
|
---|
868 | // Update version number
|
---|
869 | writer = new BufferedWriter(new FileWriter(version_filename));
|
---|
870 | writer.write(version_number);
|
---|
871 | writer.close();
|
---|
872 |
|
---|
873 | }
|
---|
874 | catch (IOException e)
|
---|
875 | {
|
---|
876 | logger.error("IO Exception " + e);
|
---|
877 | }
|
---|
878 | }
|
---|
879 |
|
---|
880 | if (subaction.equals("saveDocument"))
|
---|
881 | {
|
---|
882 | Element format_element = (Element) GSXML.getChildByTagName(request, GSXML.FORMAT_STRING_ELEM);
|
---|
883 | //String format_string = GSXML.getNodeText(format_element);
|
---|
884 | // Get display tag
|
---|
885 | Element display_format = (Element) format_element.getFirstChild();
|
---|
886 |
|
---|
887 | String collection_config = directory + "collectionConfig.xml";
|
---|
888 | Document config = this.converter.getDOM(new File(collection_config), "UTF-8");
|
---|
889 |
|
---|
890 | Node current_node = GSXML.getChildByTagName(config, "CollectionConfig");
|
---|
891 |
|
---|
892 | // Get display child
|
---|
893 | if (GSXML.getChildByTagName(current_node, "display") == null)
|
---|
894 | {
|
---|
895 | // well then create a format tag
|
---|
896 | Element display_tag = config.createElement("display");
|
---|
897 | current_node = (Node) current_node.appendChild(display_tag);
|
---|
898 | }
|
---|
899 | else
|
---|
900 | {
|
---|
901 | current_node = GSXML.getChildByTagName(current_node, "display");
|
---|
902 | }
|
---|
903 |
|
---|
904 | if (GSXML.getChildByTagName(current_node, "format") == null)
|
---|
905 | {
|
---|
906 | // well then create a format tag
|
---|
907 | Element format_tag = config.createElement("format");
|
---|
908 | current_node.appendChild(format_tag);
|
---|
909 | }
|
---|
910 |
|
---|
911 | current_node.replaceChild(config.importNode(display_format, true), GSXML.getChildByTagName(current_node, "format"));
|
---|
912 |
|
---|
913 | String new_config = this.converter.getString(config);
|
---|
914 |
|
---|
915 | new_config = StringUtils.replace(new_config, "<", "<");
|
---|
916 | new_config = StringUtils.replace(new_config, ">", ">");
|
---|
917 | new_config = StringUtils.replace(new_config, """, "\"");
|
---|
918 |
|
---|
919 | try
|
---|
920 | {
|
---|
921 | // Write to file (not original! for now)
|
---|
922 | BufferedWriter writer = new BufferedWriter(new FileWriter(collection_config + ".new"));
|
---|
923 | writer.write(new_config);
|
---|
924 | writer.close();
|
---|
925 | }
|
---|
926 | catch (IOException e)
|
---|
927 | {
|
---|
928 | logger.error("IO Exception " + e);
|
---|
929 | }
|
---|
930 | }
|
---|
931 |
|
---|
932 | if (subaction.equals("save"))
|
---|
933 | {
|
---|
934 | Element format_element = (Element) GSXML.getChildByTagName(request, GSXML.FORMAT_STRING_ELEM);
|
---|
935 | Element format_statement = (Element) format_element.getFirstChild();
|
---|
936 |
|
---|
937 | try
|
---|
938 | {
|
---|
939 | // open collectionConfig.xml and read in to w3 Document
|
---|
940 | String collection_config = directory + "collectionConfig.xml";
|
---|
941 | Document config = this.converter.getDOM(new File(collection_config), "UTF-8");
|
---|
942 |
|
---|
943 | //String tag_name = "";
|
---|
944 | int k;
|
---|
945 | int index;
|
---|
946 | Element elem;
|
---|
947 | Node current_node = GSXML.getChildByTagName(config, "CollectionConfig");
|
---|
948 | NodeList current_node_list;
|
---|
949 |
|
---|
950 | if (service.equals("ClassifierBrowse"))
|
---|
951 | {
|
---|
952 | //tag_name = "browse";
|
---|
953 | // if CLX then need to look in <classifier> X then <format>
|
---|
954 | // default is <browse><format>
|
---|
955 |
|
---|
956 | current_node = GSXML.getChildByTagName(current_node, "browse");
|
---|
957 |
|
---|
958 | // find CLX
|
---|
959 | if (classifier != null)
|
---|
960 | {
|
---|
961 | current_node_list = GSXML.getChildrenByTagName(current_node, "classifier");
|
---|
962 | index = Integer.parseInt(classifier.substring(2)) - 1;
|
---|
963 |
|
---|
964 | // index should be given by X-1
|
---|
965 | current_node = current_node_list.item(index);
|
---|
966 | // what if classifier does not have a format tag?
|
---|
967 | if (GSXML.getChildByTagName(current_node, "format") == null)
|
---|
968 | {
|
---|
969 | // well then create a format tag
|
---|
970 | Element format_tag = config.createElement("format");
|
---|
971 | current_node.appendChild(format_tag);
|
---|
972 | }
|
---|
973 | }
|
---|
974 | else
|
---|
975 | {
|
---|
976 | // To support all classifiers, set classifier to null? There is the chance here that the format tag does not exist
|
---|
977 | if (GSXML.getChildByTagName(current_node, "format") == null)
|
---|
978 | {
|
---|
979 | // well then create a format tag
|
---|
980 | Element format_tag = config.createElement("format");
|
---|
981 | current_node.appendChild(format_tag);
|
---|
982 | }
|
---|
983 | }
|
---|
984 | }
|
---|
985 | else if (service.equals("AllClassifierBrowse"))
|
---|
986 | {
|
---|
987 | current_node = GSXML.getChildByTagName(current_node, "browse");
|
---|
988 | if (GSXML.getChildByTagName(current_node, "format") == null)
|
---|
989 | {
|
---|
990 | // well then create a format tag
|
---|
991 | Element format_tag = config.createElement("format");
|
---|
992 | current_node.appendChild(format_tag);
|
---|
993 | }
|
---|
994 | }
|
---|
995 | else
|
---|
996 | {
|
---|
997 | // look in <format> with no attributes
|
---|
998 | current_node_list = GSXML.getChildrenByTagName(current_node, "search");
|
---|
999 | for (k = 0; k < current_node_list.getLength(); k++)
|
---|
1000 | {
|
---|
1001 | current_node = current_node_list.item(k);
|
---|
1002 | // if current_node has no attributes then break
|
---|
1003 | elem = (Element) current_node;
|
---|
1004 | if (elem.hasAttribute("name") == false)
|
---|
1005 | break;
|
---|
1006 | }
|
---|
1007 | }
|
---|
1008 |
|
---|
1009 | current_node.replaceChild(config.importNode(format_statement, true), GSXML.getChildByTagName(current_node, "format"));
|
---|
1010 |
|
---|
1011 | // Now convert config document to string for writing to file
|
---|
1012 | String new_config = this.converter.getString(config);
|
---|
1013 |
|
---|
1014 | new_config = StringUtils.replace(new_config, "<", "<");
|
---|
1015 | new_config = StringUtils.replace(new_config, ">", ">");
|
---|
1016 | new_config = StringUtils.replace(new_config, """, "\"");
|
---|
1017 |
|
---|
1018 | // Write to file (not original! for now)
|
---|
1019 | BufferedWriter writer = new BufferedWriter(new FileWriter(collection_config + ".new"));
|
---|
1020 | writer.write(new_config);
|
---|
1021 | writer.close();
|
---|
1022 |
|
---|
1023 | }
|
---|
1024 | catch (Exception ex)
|
---|
1025 | {
|
---|
1026 | logger.error("There was an exception " + ex);
|
---|
1027 |
|
---|
1028 | StringWriter sw = new StringWriter();
|
---|
1029 | PrintWriter pw = new PrintWriter(sw, true);
|
---|
1030 | ex.printStackTrace(pw);
|
---|
1031 | pw.flush();
|
---|
1032 | sw.flush();
|
---|
1033 | logger.error(sw.toString());
|
---|
1034 | }
|
---|
1035 |
|
---|
1036 | }
|
---|
1037 |
|
---|
1038 | return response;
|
---|
1039 | }
|
---|
1040 |
|
---|
1041 |
|
---|
1042 | }
|
---|