1 | package org.hathitrust.extractedfeatures;
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2 |
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3 | import java.io.BufferedInputStream;
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4 | import java.io.File;
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5 | import java.io.FileInputStream;
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6 | import java.io.FileNotFoundException;
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7 | import java.io.IOException;
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8 | import java.nio.file.Files;
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9 | import java.nio.file.Path;
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10 | import java.nio.file.Paths;
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11 | import java.util.ArrayList;
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12 | import java.util.stream.Stream;
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13 |
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14 | import org.apache.commons.cli.*;
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15 | import org.apache.hadoop.io.Text;
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16 |
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17 | public class ProcessForSerialSolrIngest
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18 | {
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19 | //private static final long serialVersionUID = 1L;
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20 |
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21 | protected String _input_file;
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22 | protected String _solr_base_url;
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23 | protected String _solr_collection;
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24 |
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25 | protected String _whitelist_filename;
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26 | protected String _langmap_directory;
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27 |
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28 | //protected String _solr_url;
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29 | protected String _output_dir;
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30 |
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31 | protected int _verbosity;
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32 |
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33 | public ProcessForSerialSolrIngest(String input_file, String solr_collection,
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34 | String solr_base_url, String output_dir, int verbosity)
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35 | {
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36 | _input_file = input_file;
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37 | _solr_collection = solr_collection;
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38 |
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39 | boolean use_whitelist = Boolean.getBoolean("wcsa-ef-ingest.use-whitelist");
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40 | _whitelist_filename = (use_whitelist) ? System.getProperty("wcsa-ef-ingest.whitelist-filename") : null;
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41 |
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42 | boolean use_langmap = Boolean.getBoolean("wcsa-ef-ingest.use-langmap");
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43 | _langmap_directory = (use_langmap) ? System.getProperty("wcsa-ef-ingest.langmap-directory") : null;
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44 |
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45 |
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46 | _solr_base_url = solr_base_url;
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47 | _output_dir = output_dir;
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48 | _verbosity = verbosity;
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49 | }
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50 |
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51 | protected String generateAppName()
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52 | {
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53 | String app_name = "Extract Features: Process for Serial Solr Ingest";
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54 | app_name += " [" + _solr_collection + "]";
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55 |
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56 | if (_solr_base_url != null) {
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57 | app_name += " solr_base_url=" + _solr_base_url;
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58 | }
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59 |
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60 | if (_output_dir != null) {
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61 | app_name += " output_dir=" + _output_dir;
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62 | }
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63 |
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64 | return app_name;
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65 | }
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66 |
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67 | public ArrayList<String> extrapolateSolrEndpoints(String solr_collection)
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68 | {
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69 | ArrayList<String> solr_endpoints = new ArrayList<String>();
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70 |
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71 | if (_solr_base_url != null) {
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72 | String solr_url = _solr_base_url + "/" + solr_collection + "/update";
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73 |
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74 | String solr_cloud_nodes = System.getProperty("wcsa-ef-ingest.solr-cloud-nodes",null);
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75 | if (solr_cloud_nodes != null) {
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76 | String [] cloud_nodes = solr_cloud_nodes.split(",");
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77 | for (String cn : cloud_nodes) {
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78 | String solr_endpoint = solr_url.replaceFirst("//.*?:\\d+/", "//"+cn+"/");
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79 | solr_endpoints.add(solr_endpoint);
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80 | }
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81 | }
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82 | else {
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83 | solr_endpoints.add(solr_url);
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84 | }
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85 | }
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86 |
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87 | return solr_endpoints;
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88 | }
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89 |
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90 | public ArrayList<String> readFileLines(Path list_path)
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91 | {
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92 | ArrayList<String> json_file_list = new ArrayList<String>();
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93 |
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94 | try (Stream<String> list_lines = Files.lines(list_path)) {
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95 | list_lines.forEach(line -> {
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96 | json_file_list.add(line);
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97 | });
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98 | } catch (IOException e) {
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99 | e.printStackTrace();
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100 | }
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101 |
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102 | return json_file_list;
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103 |
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104 | }
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105 |
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106 | public Text readJSONText(Path json_path)
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107 | {
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108 | File json_file = json_path.toFile();
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109 |
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110 | String json_filename = json_file.toURI().toString();
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111 | /*
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112 | try {
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113 | json_filename = json_file.getCanonicalPath();
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114 | }
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115 | catch (Exception e) {
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116 | e.printStackTrace();
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117 | }
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118 | */
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119 | String text_string = ClusterFileIO.readTextFile(json_filename);
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120 |
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121 | //ArrayList<String> text_lines = readFileLines(json_path);
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122 |
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123 | //String text_string = String.join("\n",text_lines);
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124 |
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125 | Text json_text = new Text(text_string);
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126 | return json_text;
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127 |
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128 | }
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129 |
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130 | public void execPerVolumeSequenceFile()
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131 | {
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132 | String serial_app_name = generateAppName();
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133 | System.out.println(serial_app_name);
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134 |
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135 | Path json_filelist_path = Paths.get(_input_file);
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136 |
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137 | // Read in text file
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138 | ArrayList<String> json_file_list = readFileLines(json_filelist_path);
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139 |
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140 | boolean icu_tokenize = Boolean.getBoolean("wcsa-ef-ingest.icu-tokenize");
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141 | boolean strict_file_io = Boolean.getBoolean("wcsa-ef-ingest.strict-file-io");
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142 |
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143 | ArrayList<String> solr_endpoints = extrapolateSolrEndpoints(_solr_collection);
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144 |
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145 | System.out.println("*** away to create PerVolumeJSON class, _langmap_directory = " + _langmap_directory);
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146 | PerVolumeJSON per_vol_json = new PerVolumeJSON(_input_file,_whitelist_filename, _langmap_directory,
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147 | solr_endpoints,_output_dir,_verbosity,
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148 | icu_tokenize,strict_file_io);
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149 |
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150 | // Foreach file, call per_vol_json.call()
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151 | long num_vol_ids = 0;
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152 | for (String json_filename : json_file_list) {
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153 | //Path json_path = Paths.get("file://D:/cygwin64/home/davidb/research/code-managed/hathitrust/wcsa/extracted-features-solr/trunk/solr-ingest/json-files",json_filename);
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154 | Path json_path = Paths.get("json-files",json_filename);
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155 |
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156 |
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157 | System.out.println("*** Processing jsonfile: " + json_path);
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158 | Text json_text = readJSONText(json_path);
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159 | try {
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160 | per_vol_json.call(json_text);
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161 | } catch (IOException e) {
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162 | e.printStackTrace();
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163 | }
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164 | num_vol_ids++;
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165 | }
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166 |
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167 |
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168 | System.out.println("");
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169 | System.out.println("############");
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170 | System.out.println("# Number of volume ids: " + num_vol_ids);
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171 | System.out.println("############");
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172 | System.out.println("");
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173 |
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174 |
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175 |
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176 |
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177 | }
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178 |
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179 |
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180 | public static void print_usage(HelpFormatter formatter, Options options)
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181 | {
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182 | formatter.printHelp("RUN.bash [options] input-file solr-collection", options);
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183 | }
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184 |
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185 | public static void main(String[] args) {
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186 | Options options = new Options();
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187 |
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188 | Option verbosity_opt = new Option("v", "verbosity", true,
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189 | "Set to control the level of debugging output [0=none, 1=some, 2=lots]");
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190 | verbosity_opt.setRequired(false);
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191 | options.addOption(verbosity_opt);
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192 |
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193 | Option properties_opt = new Option("p", "properties", true,
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194 | "Read in the specified Java properties file");
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195 | properties_opt.setRequired(false);
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196 | options.addOption(properties_opt);
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197 |
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198 | Option output_dir_opt = new Option("o", "output-dir", true,
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199 | "If specified, save BZipped Solr JSON files to this directory");
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200 | output_dir_opt.setRequired(false);
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201 | options.addOption(output_dir_opt);
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202 |
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203 | Option solr_base_url_opt = new Option("u", "solr-base-url", true,
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204 | "If specified, the base URL to post the Solr JSON data to");
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205 | solr_base_url_opt.setRequired(false);
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206 | options.addOption(solr_base_url_opt);
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207 |
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208 | Option read_only_opt = new Option("r", "read-only", false,
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209 | "Used to initiate a run where the files are all read in, but nothing is ingested/saved");
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210 | read_only_opt.setRequired(false);
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211 | options.addOption(read_only_opt);
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212 |
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213 | // Need to work with CLI v1.2 as this is the JAR that is bundled with Hadoop/Spark
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214 | CommandLineParser parser = new GnuParser();
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215 | //CommandLineParser parser = new DefaultParser(); // if working with CLI v1.3 and above
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216 |
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217 | HelpFormatter formatter = new HelpFormatter();
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218 | CommandLine cmd = null;
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219 |
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220 | try {
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221 | cmd = parser.parse(options, args);
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222 | }
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223 | catch (ParseException e) {
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224 | System.err.println(e.getMessage());
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225 | print_usage(formatter,options);
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226 | System.exit(1);
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227 | }
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228 |
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229 |
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230 | String verbosity_str = cmd.getOptionValue("verbosity","1");
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231 | int verbosity = Integer.parseInt(verbosity_str);
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232 |
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233 | String property_filename = cmd.getOptionValue("properties",null);
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234 |
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235 | String output_dir = cmd.getOptionValue("output-dir",null);
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236 | String solr_base_url = cmd.getOptionValue("solr-base-url",null);
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237 | boolean read_only = cmd.hasOption("read-only");
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238 |
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239 | String[] filtered_args = cmd.getArgs();
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240 |
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241 | if (filtered_args.length != 2) {
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242 | print_usage(formatter,options);
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243 | System.exit(1);
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244 | }
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245 |
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246 | if (property_filename != null) {
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247 | try {
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248 | FileInputStream fis = new FileInputStream(property_filename);
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249 | BufferedInputStream bis = new BufferedInputStream(fis);
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250 |
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251 | System.getProperties().load(bis);
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252 | }
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253 | catch (FileNotFoundException e) {
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254 | // TODO Auto-generated catch block
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255 | e.printStackTrace();
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256 | System.err.println("File not found: '" + property_filename + "'. Skipping property file read");
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257 | }
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258 | catch (IOException e) {
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259 | System.err.println("IO Exception for: '" + property_filename + "'. Malformed syntax? Skipping property file read");
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260 | }
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261 | }
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262 |
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263 | if (!read_only && ((output_dir == null) && (solr_base_url==null))) {
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264 | System.err.println("Need to specify either --solr-base-url or --output-dir otherwise generated files are not ingested/saved");
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265 | print_usage(formatter,options);
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266 | System.exit(1);
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267 | }
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268 | if (read_only) {
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269 | // For this case, need to ensure solr-url and output-dir are null
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270 | output_dir = null;
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271 | solr_base_url = null;
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272 | }
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273 |
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274 | String input_file = filtered_args[0];
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275 | String solr_collection = filtered_args[1];
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276 |
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277 | ProcessForSerialSolrIngest prep_for_ingest
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278 | = new ProcessForSerialSolrIngest(input_file,solr_collection,solr_base_url,output_dir,verbosity);
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279 |
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280 | prep_for_ingest.execPerVolumeSequenceFile();
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281 |
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282 | }
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283 | }
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