compile:
	cd java-gen-corpus; javac *.java;
#*******


single:
	./COMPX520-RUN-PNG.sh coo1.ark:/13960/t2t448j81 1


#**********
#HI-RES
#**********
hi-res-download-all:
	./COMPX520-DOWNLOADER-PNG-10PAGES-hi-res.sh java-gen-corpus/gen-50-MU-hathiValidIDList.txt MU
	./COMPX520-DOWNLOADER-PNG-10PAGES-hi-res.sh java-gen-corpus/gen-50-BK-hathiValidIDList.txt BK
	./COMPX520-DOWNLOADER-PNG-10PAGES-hi-res.sh java-gen-corpus/gen-50-SE-hathiValidIDList.txt SE
	./COMPX520-DOWNLOADER-PNG-10PAGES-hi-res.sh java-gen-corpus/gen-50-MP-hathiValidIDList.txt MP

hi-res-download-reconstructed:
	./COMPX520-DOWNLOADER-PNG-10PAGES-hi-res.sh java-gen-corpus/MU-500-reconstructed.txt MU
	./COMPX520-DOWNLOADER-PNG-10PAGES-hi-res.sh java-gen-corpus/BK-500-reconstructed.txt BK
	./COMPX520-DOWNLOADER-PNG-10PAGES-hi-res.sh java-gen-corpus/SE-500-reconstructed.txt SE
	./COMPX520-DOWNLOADER-PNG-10PAGES-hi-res.sh java-gen-corpus/MP-500-reconstructed.txt MP

######################################
#CAUTION: run must: source SETUP.bash
#Prior to running the scripts below
######################################
#Run all DOWNLOAD
#NNEEDDD TOO FIIX
gen-500-all:
	make gen-500-MU
	make gen-500-BK
	make gen-500-SE
	make gen-500-MP
	make gen-500-MX

#MUSIC, Including Sheet music
gen-500-MU:
	cd java-gen-corpus; javac *.java
	cd java-gen-corpus; java javaGenFullIDList hathiFull.txt gen-500-MU-hathiFullIDList.txt MU
	cd java-gen-corpus; java javaGenValidIDList gen-500-MU-hathiFullIDList.txt 500 gen-500-MU-hathiValidIDList.txt
	./COMPX520-DOWNLOADER-PNG-10PAGES.sh java-gen-corpus/gen-500-MU-hathiValidIDList.txt


#BOOKS, Monograhpical
gen-500-BK:
	cd java-gen-corpus; javac *.java
	cd java-gen-corpus; java javaGenFullIDList hathiFull.txt gen-500-BK-hathiFullIDList.txt BK
	cd java-gen-corpus; java javaGenValidIDList gen-500-BK-hathiFullIDList.txt 500 gen-500-BK-hathiValidIDList.txt
	./COMPX520-DOWNLOADER-PNG-10PAGES.sh java-gen-corpus/gen-500-BK-hathiValidIDList.txt


#SERIAL (journals, newspapers,etc)
gen-500-SE:
	cd java-gen-corpus; javac *.java
	cd java-gen-corpus; java javaGenFullIDList hathiFull.txt gen-500-SE-hathiFullIDList.txt SE
	cd java-gen-corpus; java javaGenValidIDList gen-500-SE-hathiFullIDList.txt 500 gen-500-SE-hathiValidIDList.txt
	./COMPX520-DOWNLOADER-PNG-10PAGES.sh java-gen-corpus/gen-500-SE-hathiValidIDList.txt


#MAPS, Including atlas and sheet maps
gen-500-MP:
	cd java-gen-corpus; javac *.java
	cd java-gen-corpus; java javaGenFullIDList hathiFull.txt gen-500-MP-hathiFullIDList.txt MP
	cd java-gen-corpus; java javaGenValidIDList gen-500-MP-hathiFullIDList.txt 500 gen-500-MP-hathiValidIDList.txt
	./COMPX520-DOWNLOADER-PNG-10PAGES.sh java-gen-corpus/gen-500-MP-hathiValidIDList.txt


#MIXED MATERIAL (This may not be required)
gen-500-MX:
	cd java-gen-corpus; javac *.java
	cd java-gen-corpus; java javaGenFullIDList hathiFull.txt gen-500-MX-hathiFullIDList.txt MX
	cd java-gen-corpus; java javaGenValidIDList gen-500-MX-hathiFullIDList.txt 500 gen-500-MX-hathiValidIDList.txt
	./COMPX520-DOWNLOADER-PNG-10PAGES.sh java-gen-corpus/gen-500-MX-hathiValidIDList.txt


#***********
#CLASSIFIERS
#***********

#HoughLinesP
run-classifier-houghlinesP-test:
        #Compile
	cd image-identification-terminal; javac javaAccuracyCalculator.java
	cd image-identification-terminal; javac -cp /Scratch/cpb16/opencv-3.4.2/build/bin/opencv-342.jar javaImageClassifier.java;
        #Run javaImageClassifier on all images in TestImages
	@echo starting classfier
	@date
	cd image-identification-terminal; ./runClassifer.sh /Scratch/cpb16/is-sheet-music-encore/download-images/MU houghlinesP log-houghlinesP-test.txt -test
	@echo finished classifier
	@date
        #Calculate the Accuracy of the classifier
	cd image-identification-terminal; java javaAccuracyCalculator log-houghlinesP-test.txt houghlinesP results.txt
        #Display output of javaImageClassifier
	cd image-identification-terminal; less log-houghlinesP-test.txt
        #Display output of javaAccuracyCalculator
	cd image-identification-terminal; less results.txt

run-classifier-houghlinesP-all:
        #Compile
	cd image-identification-terminal; javac javaAccuracyCalculator.java
	cd image-identification-terminal; javac -cp /Scratch/cpb16/opencv-3.4.2/build/bin/opencv-342.jar javaImageClassifier.java;
        #Run javaImageClassifier on all images in MU
	@echo starting classfier
	@date
	cd image-identification-terminal; ./runClassifer.sh /Scratch/cpb16/is-sheet-music-encore/download-images/MU houghlinesP log-houghlinesP-MU.txt -all
	@echo finished classifier
	@date
        #Calculate the Accuracy of the classifier
	cd image-identification-terminal; java javaAccuracyCalculator log-houghlinesP-MU.txt houghlinesP results.txt
        #Display output of javaImageClassifier
	cd image-identification-terminal; less log-houghlinesP-MU.txt
        #Display output of javaAccuracyCalculator
	cd image-identification-terminal; less results.txt

#HoughLinesP_refined
run-classifier-houghlinesP-refined-test:
	#cd image-identification-terminal; rm log-houghlinesP-refined-test.txt
        #Compile
	cd image-identification-terminal; javac javaAccuracyCalculator.java
	cd image-identification-terminal; javac -cp /Scratch/cpb16/opencv-3.4.2/build/bin/opencv-342.jar javaImageClassifier.java;
        #Run javaImageClassifier on all images in TestImages
	@echo starting classfier
	@date
	cd image-identification-terminal; ./runClassifer.sh /Scratch/cpb16/is-sheet-music-encore/download-images/MU houghlinesP-refined log-houghlinesP-refined-test.txt -test
	@echo finished classifier
	@date
        #Calculate the Accuracy of the classifier
	cd image-identification-terminal; java javaAccuracyCalculator log-houghlinesP-refined-test.txt houghlinesP-refined-test results.txt
        #Display output of javaImageClassifier
	cd image-identification-terminal; less log-houghlinesP-refined-test.txt
        #Display output of javaAccuracyCalculator output
	cd image-identification-terminal; less results.txt

run-classifier-houghlinesP-refined-all:
	cd image-identification-terminal; rm log-houghlinesP-refined-MU.txt
        #Compile
	cd image-identification-terminal; javac javaAccuracyCalculator.java
	cd image-identification-terminal; javac -cp /Scratch/cpb16/opencv-3.4.2/build/bin/opencv-342.jar javaImageClassifier.java;
        #Run javaImageClassifier on all images in MU
	@echo starting classfier
	@date
	cd image-identification-terminal; ./runClassifer.sh /Scratch/cpb16/is-sheet-music-encore/download-images/MU houghlinesP-refined log-houghlinesP-refined-MU.txt -all
	@echo finished classifier
	@date
        #Calculate the Accuracy of the classifier
	cd image-identification-terminal; java javaAccuracyCalculator log-houghlinesP-refined-MU.txt houghlinesP-refined-all results.txt
        #Display output of javaImageClassifier
	cd image-identification-terminal; less log-houghlinesP-refined-MU.txt
        #Display output of javaAccuracyCalculator
	cd image-identification-terminal; less results.txt

run-both-MU:
        #Compile
	cd image-identification-terminal; javac javaAccuracyCalculator.java
	cd image-identification-terminal; javac -cp /Scratch/cpb16/opencv-3.4.2/build/bin/opencv-342.jar javaImageClassifier.java; 
        #Run javaImageClassifier on all images in MU
	@echo starting houghlinesP classfier
	@date
	cd image-identification-terminal; ./runClassifer.sh /Scratch/cpb16/is-sheet-music-encore/download-images/MU houghlinesP log-houghlinesP-MU.txt -all
	@echo finished houghlinesP classifier
	@date
	@echo starting houghlinesP-refined classfier
	cd image-identification-terminal; ./runClassifer.sh /Scratch/cpb16/is-sheet-music-encore/download-images/MU houghlinesP-refined log-houghlinesP-refined-MU.txt -all
	@echo finished houghlinesP-refined classifier
	@date
        #Calculate the Accuracy of the classifier
	cd image-identification-terminal; java javaAccuracyCalculator log-houghlinesP-MU.txt houghlinesP results.txt
	cd image-identification-terminal; java javaAccuracyCalculator log-houghlinesP-refined-MU.txt houghlinesP-refined results.txt
        #Display the results
	cd image-identification-terminal; less results.txt
	cd image-identification-terminal; less log-houghlinesP-MU.txt
	cd image-identification-terminal; less log-houghlinesP-refined-MU.txt

run-houghlinesP-refined-corpus:
	#cd image-identification-terminal; cd log-all; rm *.txt
        #Compile
	cd image-identification-terminal; javac javaAccuracyCalculator.java
	cd image-identification-terminal; javac -cp /Scratch/cpb16/opencv-3.4.2/build/bin/opencv-342.jar javaImageClassifier.java;
        #Run javaImageClassifier on all images in Corpus
	cd image-identification-terminal; ./runClassifer.sh /Scratch/cpb16/is-sheet-music-encore/download-images/MU houghlinesP-refined log-all/log-houghlinesP-refined-MU.txt -all
	cd image-identification-terminal; ./runClassifer.sh /Scratch/cpb16/is-sheet-music-encore/download-images/BK houghlinesP-refined log-all/log-houghlinesP-refined-BK.txt -all
	cd image-identification-terminal; ./runClassifer.sh /Scratch/cpb16/is-sheet-music-encore/download-images/MP houghlinesP-refined log-all/log-houghlinesP-refined-MP.txt -all
	cd image-identification-terminal; ./runClassifer.sh /Scratch/cpb16/is-sheet-music-encore/download-images/SE houghlinesP-refined log-all/log-houghlinesP-refined-SE.txt -all
        #Calculate the Accuracy of the classifier
	cd image-identification-terminal; java javaAccuracyCalculator log-all/log-houghlinesP-refined-MU.txt houghlinesP-refined-MU log-all/results.txt
	cd image-identification-terminal; java javaAccuracyCalculator log-all/log-houghlinesP-refined-BK.txt houghlinesP-refined-BK log-all/results.txt
	cd image-identification-terminal; java javaAccuracyCalculator log-all/log-houghlinesP-refined-MP.txt houghlinesP-refined-MP log-all/results.txt
	cd image-identification-terminal; java javaAccuracyCalculator log-all/log-houghlinesP-refined-SE.txt houghlinesP-refined-SE log-all/results.txt
        #Display the results
	cd image-identification-terminal; less log-all/results.txt

run-houghlinesP-refined-corpus-hi-res:
	cd image-identification-terminal; cd log-all-hires; rm *.txt
        #Compile
	cd image-identification-terminal; javac javaAccuracyCalculator.java
	cd image-identification-terminal; javac -cp /Scratch/cpb16/opencv-3.4.2/build/bin/opencv-342.jar javaImageClassifier.java;
        #Run javaImageClassifier on all images in Corpus
	cd image-identification-terminal; ./runClassifer.sh /Scratch/cpb16/is-sheet-music-encore/hires-download-images/MU houghlinesP-refined log-all-hires/log-houghlinesP-refined-MU.txt -all
	cd image-identification-terminal; ./runClassifer.sh /Scratch/cpb16/is-sheet-music-encore/hires-download-images/BK houghlinesP-refined log-all-hires/log-houghlinesP-refined-BK.txt -all
	cd image-identification-terminal; ./runClassifer.sh /Scratch/cpb16/is-sheet-music-encore/hires-download-images/MP houghlinesP-refined log-all-hires/log-houghlinesP-refined-MP.txt -all
	cd image-identification-terminal; ./runClassifer.sh /Scratch/cpb16/is-sheet-music-encore/hires-download-images/SE houghlinesP-refined log-all-hires/log-houghlinesP-refined-SE.txt -all
        #Calculate the Accuracy of the classifier
	cd image-identification-terminal; java javaAccuracyCalculator log-all-hires/log-houghlinesP-refined-MU.txt houghlinesP-refined-MU log-all-hires/results.txt
	cd image-identification-terminal; java javaAccuracyCalculator log-all-hires/log-houghlinesP-refined-BK.txt houghlinesP-refined-BK log-all-hires/results.txt
	cd image-identification-terminal; java javaAccuracyCalculator log-all-hires/log-houghlinesP-refined-MP.txt houghlinesP-refined-MP log-all-hires/results.txt
	cd image-identification-terminal; java javaAccuracyCalculator log-all-hires/log-houghlinesP-refined-SE.txt houghlinesP-refined-SE log-all-hires/results.txt
        #Display the results
	cd image-identification-terminal; less log-all-hires/results.txt