s Command: perl -S /research/ak19/GS2bin_4Jul2013/bin/script/full-import.pl -gli -language en -collectdir /research/ak19/GS2bin_4Jul2013/collect pdfbox import.pl> AutoLoadConverters: PDFBox Extension to Greenstone detected for PDFPlugin import.pl> Removing current contents of the archives directory... import.pl> Removing contents of the collection "tmp" directory... import.pl> Global file scan checking directory: /research/ak19/GS2bin_4Jul2013/collect/pdfbox/import import.pl> EmbeddedMetadataPlugin: processing A9-access-best-practices.pdf import.pl> Extracted 29 pieces of metadata from /research/ak19/GS2bin_4Jul2013/collect/pdfbox/import/A9-access-best-practices.pdf EXIF block import.pl> EmbeddedMetadataPlugin: processing Install-en.pdf import.pl> Extracted 26 pieces of metadata from /research/ak19/GS2bin_4Jul2013/collect/pdfbox/import/Install-en.pdf EXIF block import.pl> EmbeddedMetadataPlugin: processing jpeg2000.pdf import.pl> Extracted 12 pieces of metadata from /research/ak19/GS2bin_4Jul2013/collect/pdfbox/import/jpeg2000.pdf EXIF block import.pl> MetadataXMLPlugin: processing metadata.xml import.pl> EmbeddedMetadataPlugin: processing pdf03.pdf import.pl> Extracted 16 pieces of metadata from /research/ak19/GS2bin_4Jul2013/collect/pdfbox/import/pdf03.pdf EXIF block import.pl> Converting A9-access-best-practices.pdf to html format import.pl> calling cmd "/usr/bin/perl" -S gsConvert.pl -verbose 2 -pdf_zoom 2 -errlog "/research/ak19/GS2bin_4Jul2013/collect/pdfbox/tmp/1372996040/err.log" -output html "/research/ak19/GS2bin_4Jul2013/collect/pdfbox/tmp/1372996040/A9-access-best-practices.pdf" import.pl> Error executing pdftohtml.pl import.pl> pdftohtml error log: import.pl> Error: PDF version 1.7 -- xpdf supports version 1.4 (continuing anyway) import.pl> Error (0): PDF file is damaged - attempting to reconstruct xref table... import.pl> Error: Couldn't find trailer dictionary import.pl> Error: Couldn't read xref table import.pl> Could not convert A9-access-best-practices.pdf to html format import.pl> Error: PDF version 1.7 -- xpdf supports version 1.4 (continuing anyway) import.pl> Error (0): PDF file is damaged - attempting to reconstruct xref table... import.pl> Error: Couldn't find trailer dictionary import.pl> Error: Couldn't read xref table import.pl> WARNING: No plugin could process A9-access-best-practices.pdf import.pl> Converting Install-en.pdf to html format import.pl> calling cmd "/usr/bin/perl" -S gsConvert.pl -verbose 2 -pdf_zoom 2 -errlog "/research/ak19/GS2bin_4Jul2013/collect/pdfbox/tmp/1372996040/err.log" -output html "/research/ak19/GS2bin_4Jul2013/collect/pdfbox/tmp/1372996040/Install-en.pdf" import.pl> HTMLPlugin processing /research/ak19/GS2bin_4Jul2013/collect/pdfbox/tmp/1372996040/Install-en.html import.pl> Converting jpeg2000.pdf to html format import.pl> calling cmd "/usr/bin/perl" -S gsConvert.pl -verbose 2 -pdf_zoom 2 -errlog "/research/ak19/GS2bin_4Jul2013/collect/pdfbox/tmp/1372996041/err.log" -output html "/research/ak19/GS2bin_4Jul2013/collect/pdfbox/tmp/1372996041/jpeg2000.pdf" import.pl> HTMLPlugin processing /research/ak19/GS2bin_4Jul2013/collect/pdfbox/tmp/1372996041/jpeg2000.html import.pl> Converting pdf03.pdf to html format import.pl> calling cmd "/usr/bin/perl" -S gsConvert.pl -verbose 2 -pdf_zoom 2 -errlog "/research/ak19/GS2bin_4Jul2013/collect/pdfbox/tmp/1372996041/err.log" -output html "/research/ak19/GS2bin_4Jul2013/collect/pdfbox/tmp/1372996041/pdf03.pdf" import.pl> HTMLPlugin processing /research/ak19/GS2bin_4Jul2013/collect/pdfbox/tmp/1372996041/pdf03.html import.pl> ********************************************* import.pl> Import complete import.pl> ********************************************* import.pl> * 4 documents were considered for processing import.pl> * 3 were processed and included in the collection import.pl> * 1 was rejected import.pl> See /research/ak19/GS2bin_4Jul2013/collect/pdfbox/etc/fail.log for a list of unrecognised and/or rejected documents import.pl> Command complete. import.pl> Extracting new metadata from archive files. import.pl> Archived metadata extraction complete. Command: perl -S /research/ak19/GS2bin_4Jul2013/bin/script/full-buildcol.pl -gli -language en -collectdir /research/ak19/GS2bin_4Jul2013/collect pdfbox buildcol.pl> AutoLoadConverters: PDFBox Extension to Greenstone detected for PDFPlugin buildcol.pl> *** creating the compressed text buildcol.pl> collecting text statistics (mgpp_passes -T1) buildcol.pl> ArchivesInfPlugin: processing /research/ak19/GS2bin_4Jul2013/collect/pdfbox/archives/archiveinf-doc.gdb buildcol.pl> GreenstoneXMLPlugin: processing HASH8a5cfb6b.dir/doc.xml buildcol.pl> GreenstoneXMLPlugin: processing HASHf7a612dc.dir/doc.xml buildcol.pl> GreenstoneXMLPlugin: processing HASH017928fb.dir/doc.xml buildcol.pl> Stats (Compressing text from text) buildcol.pl> Total bytes in collection: 198714 buildcol.pl> Total bytes in text: 198717 buildcol.pl> creating the compression dictionary buildcol.pl> compressing the text (mgpp_passes -T2) buildcol.pl> ArchivesInfPlugin: processing /research/ak19/GS2bin_4Jul2013/collect/pdfbox/archives/archiveinf-doc.gdb buildcol.pl> GreenstoneXMLPlugin: processing HASH8a5cfb6b.dir/doc.xml buildcol.pl> GreenstoneXMLPlugin: processing HASHf7a612dc.dir/doc.xml buildcol.pl> GreenstoneXMLPlugin: processing HASH017928fb.dir/doc.xml buildcol.pl> Stats (Compressing text from text) buildcol.pl> Total bytes in collection: 198714 buildcol.pl> Total bytes in text: 198717 buildcol.pl> *** building index text;dc.Title,ex.dc.Title,Title;Source; in subdirectory idx buildcol.pl> creating index dictionary (mgpp_passes -I1) buildcol.pl> ArchivesInfPlugin: processing /research/ak19/GS2bin_4Jul2013/collect/pdfbox/archives/archiveinf-doc.gdb buildcol.pl> GreenstoneXMLPlugin: processing HASH8a5cfb6b.dir/doc.xml buildcol.pl> GreenstoneXMLPlugin: processing HASHf7a612dc.dir/doc.xml buildcol.pl> GreenstoneXMLPlugin: processing HASH017928fb.dir/doc.xml buildcol.pl> Stats (Creating index text;dc.Title,ex.dc.Title,Title;Source;) buildcol.pl> Total bytes in collection: 198714 buildcol.pl> Total bytes in text;dc.Title,ex.dc.Title,Title;Source;: 174971 buildcol.pl> inverting the text (mgpp_passes -I2) buildcol.pl> ArchivesInfPlugin: processing /research/ak19/GS2bin_4Jul2013/collect/pdfbox/archives/archiveinf-doc.gdb buildcol.pl> GreenstoneXMLPlugin: processing HASH8a5cfb6b.dir/doc.xml buildcol.pl> GreenstoneXMLPlugin: processing HASHf7a612dc.dir/doc.xml buildcol.pl> GreenstoneXMLPlugin: processing HASH017928fb.dir/doc.xml buildcol.pl> Stats (Creating index text;dc.Title,ex.dc.Title,Title;Source;) buildcol.pl> Total bytes in collection: 198714 buildcol.pl> Total bytes in text;dc.Title,ex.dc.Title,Title;Source;: 174971 buildcol.pl> create the weights file buildcol.pl> creating 'on-disk' stemmed dictionary buildcol.pl> creating stem indexes buildcol.pl> BuildDir: /research/ak19/GS2bin_4Jul2013/collect/pdfbox/building buildcol.pl> *** creating the info database and processing associated files buildcol.pl> ArchivesInfPlugin: processing /research/ak19/GS2bin_4Jul2013/collect/pdfbox/archives/archiveinf-doc.gdb buildcol.pl> GreenstoneXMLPlugin: processing HASH8a5cfb6b.dir/doc.xml buildcol.pl> GreenstoneXMLPlugin: processing HASHf7a612dc.dir/doc.xml buildcol.pl> GreenstoneXMLPlugin: processing HASH017928fb.dir/doc.xml buildcol.pl> *** outputting information for classifier: CL1 buildcol.pl> *** outputting information for classifier: CL2 buildcol.pl> *** outputting information for classifier: oai buildcol.pl> *** creating auxiliary files buildcol.pl> Copying rss-items.rdf file from archives to building (eventually to index) buildcol.pl> Command complete.