[27621] | 1 | #!/usr/bin/perl -w
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[27556] | 2 |
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[27621] | 3 | # This program is meant to run the nightly diffcol
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| 4 | # It is meant to be an equivalent for the existing task bash script
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| 5 | # But it is intended to be expanded to work for Windows and GS3
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| 6 | # For windows, need to REMEMBER to set the correct shebangs at the top
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[27556] | 7 |
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[27663] | 8 |
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| 9 | # TODO:
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| 10 | # Have a caveat mode and a stable mode (as in snapshot/task.pl)
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| 11 | #
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| 12 | #} elsif ( $ENV{'TASK_NAME'} =~ "gs2-diffcol-(caveat|stable)" ) {
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| 13 | # $major_version = 2;
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| 14 | # $prefix="2t";
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| 15 | # $rk="tk2"; # test kit
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| 16 | #} elsif ( $ENV{'TASK_NAME'} =~ "gs3-diffcol-(caveat|stable)" ) {
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| 17 | # $major_version = 3;
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| 18 | # $prefix="3t";
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| 19 | # $rk="tk3"; # test kit
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| 20 |
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[27628] | 21 | package diffcoltask;
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[27556] | 22 |
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[27621] | 23 | use Cwd;
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[27628] | 24 | use Switch; # for switch(val) { case: ; ...}
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[27621] | 25 | use File::Path; # for rmdir and mkdir type functions
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| 26 | use File::Copy; # for recursive copying of folders but skipping .svn
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| 27 | use File::Basename;
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| 28 |
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[27628] | 29 | use strict;
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| 30 | no strict 'subs'; # allow barewords (eg STDERR) as function arguments
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[27621] | 31 |
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| 32 | my $isWin = ($^O =~ m/mswin/i) ? 1 : 0;
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| 33 | my $sep = $isWin ? "\\" : "/";
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| 34 | my $pathsep = $isWin ? ";" : ":";
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| 35 | #my $script_ext = $isWin ? ".bat" : ".bash";
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| 36 | my $setup_script = "setup"; # needs to become gs3-setup for GS3
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[27687] | 37 | my $use_blat = 0; # if we ever get blat to send mail/attachments on Windows working, set this to 1
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[27621] | 38 |
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[27701] | 39 |
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[27621] | 40 | # TASK_HOME should be the toplevel diffcol folder
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| 41 | $ENV{'TASK_HOME'} = getcwd unless defined $ENV{'TASK_HOME'};
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[27701] | 42 | if($isWin) {
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| 43 | $ENV{'TASK_HOME'} =~ s@\/@\\@g;
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| 44 | # need to convert TASK_HOME path name to resolve very subtle bug when running task.pl via
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| 45 | # run-gs2-diffcol.bat which uses environment.pl's TASK_HOME setting via envi
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| 46 | # At that point TASK_HOME is already defined but ends up lowercase, so that entries in archiveinf-doc
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| 47 | # end up sorted differently when db2txt -sort is applied compared to if TASK_HOME had kept its case.
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| 48 | require Win32; # for working out Windows Long Filenames from Win 8.3 short filenames
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| 49 | $ENV{'TASK_HOME'} = &Win32::GetLongPathName($ENV{'TASK_HOME'});
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| 50 | }
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[27621] | 51 | ## print STDERR "@@@ TASK_HOME: ".$ENV{'TASK_HOME'}."\n";
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| 52 |
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| 53 |
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[27678] | 54 | $ENV{'BIN_DIR'} = &filename_concat($ENV{'TASK_HOME'}, "bin");
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| 55 |
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| 56 | # we'll be using BLAT to send mail attachments on Windows
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[27687] | 57 | my $blat = $use_blat ? &filename_concat($ENV{'BIN_DIR'}, "blat", "full", "blat.exe") : 0;
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| 58 | if($isWin && $use_blat && ! -e $blat) {
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| 59 | print STDERR "\n***********************************\n";
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| 60 | print STDERR "No blat.exe found in $blat.\n";
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| 61 | print STDERR "Blat needed to send mail with attachments on Windows.\n";
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| 62 | print STDERR "Extract the blat zip file found in $ENV{'BIN_DIR'}\n";
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| 63 | print STDERR "for your bit architecture and name the folder 'blat'\n";
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| 64 | print STDERR "***********************************\n\n";
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[27678] | 65 | $blat = 0;
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| 66 | }
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| 67 |
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| 68 |
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[27668] | 69 | $ENV{'DATA_DIR'} = &filename_concat($ENV{'TASK_HOME'}, "diffcol-data");
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| 70 | $ENV{'UPLOAD_DIR'} = &filename_concat($ENV{'TASK_HOME'}, "diffcol-reports");
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[27621] | 71 | $ENV{'MONITOR_EMAIL'} = "greenstone_team\@cs.waikato.ac.nz"; # need to escape @ sign
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[27678] | 72 | $ENV{'GSDL_SMTP'} = ""; #"smtp.gmail.com";
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[27621] | 73 | ##print STDERR "@@@ email: ".$ENV{'MONITOR_EMAIL'}."\n";
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| 74 |
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| 75 | # control if an existing compiled greenstone is used
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| 76 | # or, if one should be checked out, which revision to checkout from svn
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| 77 | $ENV{'SVN_OPT_REV'} = "-r head";
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[27656] | 78 | #$ENV{'GSDLHOME'}=
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| 79 | #$ENV{'GSDL3SRCHOME'}=
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[27621] | 80 |
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[27628] | 81 |
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[27677] | 82 | # if the first arg is a digit, it's the new envi verbosity param. Take it off the array
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| 83 | my $envi_verbose = shift(@ARGV) if(exists $ARGV[0] && $ARGV[0] =~ m/^\d+$/);
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[27628] | 84 |
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| 85 | #parse arguments
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| 86 | my $action = "all";
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| 87 | if(scalar(@ARGV) > 1) {
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| 88 | &printusage();
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| 89 | exit 0;
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| 90 | }
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| 91 |
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| 92 | if(scalar(@ARGV) == 0) {
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| 93 | $action="all";
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| 94 | }
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| 95 | else {
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| 96 | switch ($ARGV[0]) {
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| 97 | case qr/^(-h|-help|help)$/i { &printusage; exit 0; }
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| 98 | case qr/^(setup_greenstone|run_test|summarise|upload|all)$/ { $action=$ARGV[0]; }
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| 99 | else {
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| 100 | print STDERR "Bad subcommand.\n";
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| 101 | &printusage;
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| 102 | exit -1;
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| 103 | }
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| 104 | }
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| 105 | }
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| 106 |
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[27621] | 107 | #check key environment vars are set
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| 108 | if(!defined $ENV{'UPLOAD_DIR'}) {
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[27629] | 109 | print STDERR "Please set a UPLOAD_DIR for the test in an environment.sh file\n";
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[27621] | 110 | #return 1;
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| 111 | }
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| 112 | if(!defined $ENV{'DATA_DIR'}) {
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[27629] | 113 | print STDERR "Please set a DATA_DIR for the test in an environment.sh file\n";
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[27621] | 114 | #return 1;
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| 115 | }
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| 116 | if(!defined $ENV{'MONITOR_EMAIL'}) {
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[27629] | 117 | print STDERR "Please set a MONITOR_EMAIL for the test in an environment.sh file\n";
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[27621] | 118 | #return 1;
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| 119 | }
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| 120 |
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| 121 | if($ENV{'DATA_DIR'} eq "/") {
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[27629] | 122 | print STDERR "DATA_DIR should not be the fs root\n";
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[27621] | 123 | #return 1;
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| 124 | }
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| 125 |
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[27629] | 126 | print STDERR "DATA_DIR: ".$ENV{'DATA_DIR'}."\n";
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| 127 | print STDERR "UPLOAD_DIR: ".$ENV{'UPLOAD_DIR'}."\n";
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[27621] | 128 |
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| 129 | #create an id for this test
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| 130 | my ($sec,$min,$hour,$mday,$mon,$year,$wday,$yday,$isdst) = localtime(time);
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| 131 | $year += 1900;
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| 132 | $mon += 1;
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| 133 | $mon = "0$mon" if ($mon < 10);
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| 134 | $mday = "0$mday" if ($mday < 10);
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[27702] | 135 | my $dateid="$year.$mon.$mday"; #my $dateid=($year+1900)."-".($mon+1)."-$mday";
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[27621] | 136 |
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[27629] | 137 | print STDERR "Starting test '$dateid'\n";
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[27621] | 138 |
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| 139 |
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| 140 | # http://stackoverflow.com/questions/2149368/how-can-i-loop-through-files-in-a-directory-in-perl
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| 141 | $ENV{'CLASSPATH'} = "";
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| 142 | my $jar_lib_path = $ENV{'TASK_HOME'}.$sep."lib";
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| 143 | my @files = <$jar_lib_path/*.jar>; # /full/path/to/diffcol/lib/*jar
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[27628] | 144 | foreach my $file (@files) {
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[27668] | 145 | $file =~ s@\/@\\@g if $isWin;
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[27621] | 146 | $ENV{'CLASSPATH'}=$file.$pathsep.$ENV{'CLASSPATH'};
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| 147 | }
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| 148 | ##print STDERR "**** classpath: ".$ENV{'CLASSPATH'}."\n";
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| 149 |
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| 150 |
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| 151 | #set the location of the full report
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| 152 | my $xmlout=filename_concat($ENV{'DATA_DIR'}, "full-report-$dateid.xml");
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| 153 | ##print STDERR "XML: $xmlout\n";
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| 154 |
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| 155 | # the toplevel folder of the greenstone installation being used
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| 156 | my $greenstone_home="";
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| 157 | # gsdl is the checkout folder and can be greenstone2 or greenstone3
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| 158 | my $gsdl="greenstone2";
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| 159 |
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| 160 |
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| 161 | # Check if using existing compiled-up greenstone installation
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| 162 | # and set the greenstone_home location accordingly
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| 163 |
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| 164 | if(defined $ENV{'GSDL3SRCHOME'} || defined $ENV{'GSDLHOME'}) {
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[27629] | 165 | print STDERR "Found existing Greenstone home, will use that instead\n";
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[27621] | 166 | $greenstone_home=$ENV{'GSDLHOME'};
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| 167 | } else {
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| 168 | $greenstone_home=filename_concat($ENV{'DATA_DIR'}, $gsdl);
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| 169 | }
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| 170 | ##print STDERR "GSHOME: $greenstone_home\n";
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| 171 |
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[27628] | 172 | #do the requested action
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| 173 | if($action eq "setup_greenstone") {
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| 174 | &setup_greenstone;
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| 175 | }
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| 176 | elsif ($action eq "run_test") {
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| 177 | &run_test;
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| 178 | }
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| 179 | elsif ($action eq "summarise") {
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| 180 | &summarise;
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| 181 | }
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| 182 | elsif ($action eq "upload") {
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| 183 | &upload;
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| 184 | &mail_with_report_attached;
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| 185 | }
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| 186 | elsif ($action eq "all") {
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| 187 | &setup_greenstone;
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| 188 | &run_test;
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| 189 | &summarise;
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| 190 | &upload;
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| 191 | &mail_with_report_attached;
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| 192 | }
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[27621] | 193 |
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| 194 | ##********************************
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| 195 |
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[27628] | 196 | sub printusage
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| 197 | {
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| 198 | print STDERR "Run as: $0 (help|setup_greenstone|run_test|summarise|upload|all)\n";
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| 199 | }
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[27621] | 200 |
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| 201 | #http://stackoverflow.com/questions/7427262/read-a-file-and-save-it-in-variable-using-shell-script
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| 202 |
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| 203 | sub setup_greenstone
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| 204 | {
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| 205 | #clean up from previous tests
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[27628] | 206 | print STDERR "about to clean up any old tests (Ctrl-C to cancel)"; # no newline
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[27621] | 207 | for my $i ( 1..5 ) {
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| 208 | sleep 1; # 1 second
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[27628] | 209 | print STDERR ".";
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[27621] | 210 | }
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[27628] | 211 | print STDERR "\n";
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[27621] | 212 |
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| 213 | # http://perldoc.perl.org/File/Path.html
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[27629] | 214 | print STDERR "cleaning up previous tests\n";
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[27621] | 215 | &File::Path::remove_tree($ENV{'DATA_DIR'});
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| 216 |
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[27629] | 217 | print STDERR "creating the data dir\n";
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[27621] | 218 | &File::Path::make_path($ENV{'DATA_DIR'}); # works like mkdir -p
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| 219 |
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| 220 | chdir($ENV{'DATA_DIR'});
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| 221 |
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| 222 | # use existing compiled-up greenstone installation, if a GSDLHOME set
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| 223 | if(defined $ENV{'GSDL3SRCHOME'} || defined $ENV{'GSDLHOME'}) {
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[27710] | 224 | print STDERR "Found existing Greenstone home, will use that instead\n";
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[27621] | 225 | return;
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| 226 | }
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| 227 |
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| 228 | # Else checkout a GS from svn into DATA_DIR
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| 229 |
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| 230 | #svn checkout of main gsdl directory
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[27629] | 231 | print STDERR "checkout $gsdl:\n";
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[27621] | 232 | my $cmd = "svn co ".$ENV{'SVN_OPT_REV'}." http://svn.greenstone.org/main/trunk/greenstone2 $gsdl";
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| 233 | ##print STDERR "Checkout CMD: $cmd\n";
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| 234 |
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| 235 | # # unlike backticks operator, system() will print the output of the command to the screen as it executes
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| 236 | # http://stackoverflow.com/questions/758611/how-to-flush-output-in-backticks-in-perl?rq=1
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| 237 | my $status = system "$cmd"; #my $status = `$cmd`;
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[27668] | 238 | if($status != 0) {
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| 239 | print STDERR "@@@ SVN checkout of $gsdl failed\n";
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| 240 | exit -1;
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| 241 | }
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[27629] | 242 | print STDERR "done\n";
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[27621] | 243 |
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| 244 | ##print STDERR "$ENV{'DATA_DIR'}$sep$gsdl\n";
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| 245 |
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| 246 | chdir("$ENV{'DATA_DIR'}$sep$gsdl");
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| 247 |
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| 248 | ##print STDERR "@@@ OS: $^O.|".$Config{'archname64'}."|\n";
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| 249 |
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[27668] | 250 |
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| 251 | if($isWin) {
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| 252 | print STDERR "Compiling $gsdl using makegs2.bat running in auto (silent) mode\n";
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| 253 |
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| 254 | # we're now in the GS2 folder, call makegs2 with silent param
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| 255 | $cmd = "makegs2.bat silent 2>> $ENV{'DATA_DIR'}/compilation-errors"; # STDERR is sent to compilation-errors file
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| 256 | $status = system $cmd;
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| 257 |
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[27710] | 258 | } else { # if we're on linux/darwin, need gnome-lib for the correct architecture. And need imagemagick to build imgs in collections
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| 259 |
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| 260 | my $isMac = ($^O =~ m/macos|darwin/i) ? 1 : 0;
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| 261 | my $bit_arch=`uname -m`;
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| 262 |
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| 263 | # imagmagick binary
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| 264 | print STDERR "Getting imagemagick binary\n";
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[27724] | 265 |
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| 266 | my $os = $isMac ? "darwin" : "linux";
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| 267 | my $imagickzip = "imagemagick-$os";
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[27668] | 268 |
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[27710] | 269 | if($isMac) {
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[27724] | 270 | $imagickzip .= "-10.5.tar.gz";
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| 271 | # &File::Path::make_path($ENV{'DATA_DIR'}."$sep$gsdl$sep$os"); # need to ensure gsdl/bin/darwin exists
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| 272 | # the following mac img bin contains binaries that points to libraries containing fixed paths to /home/max
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| 273 | # $cmd = "svn export http://svn.greenstone.org/main/trunk/binaries/mac/intel/imagemagick bin/darwin/imagemagick";
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| 274 | # $status = system($cmd);
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[27710] | 275 | } else { # linux
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| 276 | my $extension64 = ($bit_arch =~ m/64$/) ? "-x64" : "";
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[27724] | 277 | $imagickzip .= "$extension64.tar.gz";
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| 278 | }
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[27710] | 279 |
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[27724] | 280 | $cmd = "svn export http://svn.greenstone.org/gs2-extensions/imagemagick/trunk/$imagickzip ext/$imagickzip";
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| 281 | $status = system ($cmd);
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| 282 | system("cd ext && tar -xvzf $imagickzip");
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[27710] | 283 |
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| 284 | # gnomelib binary
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[27629] | 285 | print STDERR "setting up gnome-lib-minimal for compilation\n";
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[27621] | 286 |
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| 287 | # To get gnome-lib, need to determine bit architecture of the linux/darwin
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| 288 | # http://stackoverflow.com/questions/8963400/the-correct-way-to-read-a-data-file-into-an-array
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| 289 | # $Config{'archname64'} doesn't work on the Ubuntu and the Sys::Info package seems to not be supported
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| 290 | # well on ActivePerl.
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| 291 | # But since we know we're on a Linux/Darwin machine at this point, wecan just run `uname -m` and other linux cmds
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| 292 |
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[27710] | 293 | my $gnome_lib_file = $isMac ? "darwin-intel" : "linux"; # assuming all darwin is intel, not ppc!!
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[27621] | 294 |
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| 295 | $gnome_lib_file .= "-x64" if($bit_arch =~ m/64$/);
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| 296 |
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| 297 | #svn checkout gnome-lib for this linux/darwin
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| 298 | chdir("$ENV{'DATA_DIR'}$sep$gsdl$sep"."ext"); #cd $DATA_DIR/$gsdl/ext
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| 299 |
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| 300 | ##print STDERR "**** gnomelib: $gnome_lib_file\n";
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| 301 |
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| 302 | # checkout and unpack gnome-lib-minimal
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| 303 |
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| 304 | #svn export http://svn.greenstone.org/gs2-extensions/gnome-lib/trunk/gnome-lib-minimal-linux-x64.tar.gz gl.tar.gz
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| 305 | $cmd = "svn export http://svn.greenstone.org/gs2-extensions/gnome-lib/trunk/gnome-lib-minimal-".$gnome_lib_file.".tar.gz gl.tar.gz";
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| 306 | system $cmd;
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| 307 | system ("tar -xvzf gl.tar.gz");
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| 308 |
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| 309 | chdir("gnome-lib-minimal");
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| 310 | ##print STDERR "*** ARCH: $bit_arch\n";
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| 311 |
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| 312 | # need to run source devel.bash on gnome-lib followed by configure, make, make install
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| 313 | # in one go, in order to preserve the compile environment set up by sourcing devel.bash
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| 314 |
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| 315 | # http://stackoverflow.com/questions/7369145/activating-a-virtualenv-using-a-shell-script-doesnt-seem-to-work
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| 316 | # http://ubuntuforums.org/showthread.php?t=1932504 linking /bin/sh to bash instead of dash
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| 317 |
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| 318 | # $cmd = "bash -c \"source ./devel.bash && cd ../.. && ./configure --enable-apache-httpd && make && make install\"";
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| 319 | $cmd = "bash -c \"";
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| 320 |
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| 321 | $cmd .= "source ./devel.bash";
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| 322 | $cmd .= " && cd ../..";
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| 323 |
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| 324 | #configure
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| 325 | # $cmd .= " && ./configure";
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| 326 | $cmd .= " && echo 'configure $gsdl: ' ";
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| 327 | $cmd .= " && echo '<configure>' >> $xmlout";
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| 328 | $cmd .= " && ./configure 2>> $ENV{'DATA_DIR'}/compilation-errors"; # configure
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| 329 | $cmd .= " && echo '</configure>' >> $xmlout";
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| 330 | $cmd .= " && echo 'done'";
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| 331 |
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| 332 | #make
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| 333 | $cmd .= " && echo 'make $gsdl: '";
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| 334 | $cmd .= " && echo '<make>' >> $xmlout";
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| 335 | $cmd .= " && make 2>> $ENV{'DATA_DIR'}/compilation-errors"; # make
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| 336 | $cmd .= " && echo '</make>' >> $xmlout";
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| 337 | $cmd .= " && echo 'done'";
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| 338 |
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| 339 | #make install
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| 340 | $cmd .= " && echo 'make install $gsdl: '";
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| 341 | $cmd .= " && echo '<make-install>' >> $xmlout";
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| 342 | $cmd .= " && make install 2>> $ENV{'DATA_DIR'}/compilation-errors"; # make install
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| 343 | $cmd .= " && echo '</make-install>' >> $xmlout";
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| 344 | $cmd .= " && echo 'done'";
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| 345 |
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| 346 | $cmd .= "\""; # close off cmd to bash and run it
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[27668] | 347 | $status = system $cmd;
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[27724] | 348 |
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| 349 |
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| 350 | # Moving imagemagick after instead of before compilation, since bin/darwin gets overwritten during compilation
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| 351 | move("$ENV{'DATA_DIR'}$sep$gsdl$sep"."ext/imagemagick/$os", "$ENV{'DATA_DIR'}$sep$gsdl$sep"."bin/$os/imagemagick"); # http://www.perlmonks.org/?node_id=586537
|
---|
| 352 | unlink "$ENV{'DATA_DIR'}/$gsdl"."/ext/$imagickzip" or warn "Could not unlink ext/$imagickzip: $!";
|
---|
| 353 | &File::Path::remove_tree("$ENV{'DATA_DIR'}$sep$gsdl$sep"."ext/imagemagick"); # the untarred parent folder
|
---|
| 354 |
|
---|
[27621] | 355 | }
|
---|
[27668] | 356 |
|
---|
| 357 | if($status != 0) {
|
---|
| 358 | print STDERR "@@@ Compile failed\n";
|
---|
| 359 | exit -1;
|
---|
| 360 | }
|
---|
[27724] | 361 |
|
---|
[27621] | 362 | # set the path to the greenstone_home variable
|
---|
| 363 | $greenstone_home="$ENV{'DATA_DIR'}$sep$gsdl";
|
---|
| 364 |
|
---|
| 365 | }
|
---|
| 366 |
|
---|
| 367 | # http://stackoverflow.com/questions/3377879/how-do-i-receive-command-output-immediately
|
---|
| 368 | sub run_test
|
---|
| 369 | {
|
---|
[27668] | 370 | open (my $xml_fh, '>'.$xmlout) || die "Could not open xml file $xmlout for appending: $!\n";
|
---|
[27621] | 371 |
|
---|
| 372 | # perform the requested subcommands, outputting xml information
|
---|
| 373 | print $xml_fh "<test time=\"$dateid\" id=\"$dateid\">\n";
|
---|
| 374 |
|
---|
[27724] | 375 | # make sure that diffcol/model-collect is up to date before copying it over to greenstone-home
|
---|
| 376 |
|
---|
[27621] | 377 | print $xml_fh "Updating $ENV{'TASK_HOME'}/model-collect:\n";
|
---|
| 378 | my $cmd = "svn up $ENV{'TASK_HOME'}/model-collect"; #chdir("$ENV{'TASK_HOME'}/model-collect");
|
---|
| 379 | my $status = system "$cmd";
|
---|
| 380 |
|
---|
| 381 | # go to whichever greenstone_home we're using
|
---|
| 382 | chdir($greenstone_home);
|
---|
| 383 |
|
---|
| 384 | # get svn info
|
---|
[27629] | 385 | print STDERR "getting svn info: $xmlout\n";
|
---|
[27621] | 386 | print $xml_fh "<svn-info>\n";
|
---|
[27668] | 387 | &run_and_print_cmd("svn info", $xml_fh);
|
---|
[27621] | 388 | print $xml_fh "</svn-info>\n";
|
---|
[27629] | 389 | print STDERR "done\n";
|
---|
[27621] | 390 |
|
---|
| 391 | #make two copies of the model-collect directory in gsdl
|
---|
| 392 | #one to be rebuilt and one as the basis for comparison
|
---|
| 393 | #strip both of all .svn directories
|
---|
| 394 |
|
---|
| 395 | #copy the model collections to the collect folder to be rebuilt
|
---|
[27629] | 396 | print STDERR "installing test collections and model collections to new $gsdl installation... ";
|
---|
[27621] | 397 |
|
---|
| 398 | #clean up
|
---|
| 399 | if(-d "collect") {
|
---|
| 400 | &File::Path::remove_tree("collect") || die "Error could not delete collect: $!";
|
---|
| 401 | }
|
---|
| 402 | &File::Path::remove_tree("model-collect");
|
---|
| 403 |
|
---|
| 404 | #copy to collect and strip .svn subfolders
|
---|
| 405 | &File::Path::make_path("collect"); # create the folder and copy contents across
|
---|
| 406 | ©_recursively(&filename_concat("$ENV{'TASK_HOME'}","model-collect"), "collect", ".svn");
|
---|
| 407 |
|
---|
| 408 | #make the model copy
|
---|
| 409 | &File::Path::make_path("model-collect");
|
---|
| 410 | ©_recursively("collect", "model-collect"); # copy contents across
|
---|
| 411 |
|
---|
[27629] | 412 | print STDERR "done\n";
|
---|
[27621] | 413 |
|
---|
| 414 |
|
---|
| 415 | #for each collection, import, build and diff with its model counterpart
|
---|
| 416 | opendir my($collect_handle), "collect" or die "Could not open dir $greenstone_home/collect: $!";
|
---|
| 417 | for my $collection (readdir $collect_handle) {
|
---|
| 418 | next if ($collection eq "." || $collection eq "..");
|
---|
[27630] | 419 | ##next if ($collection ne "Small-HTML"); ## TEMPORARY, FOR TESTING THIS SCRIPT
|
---|
[27621] | 420 |
|
---|
| 421 | #escape the filename (in case of space)
|
---|
| 422 | $collection =~ s@ @\\ @g;
|
---|
| 423 | #getting just the basename of the collection would have been necessary had we not cd-ed into $gsdl
|
---|
| 424 |
|
---|
| 425 | print STDERR "*** Found collection $collection\n";
|
---|
| 426 | print $xml_fh "<collection-test name=\"$collection\">\n";
|
---|
| 427 |
|
---|
| 428 | #import
|
---|
| 429 | # Ensure the OIDtype for importing is hash_on_full_filename
|
---|
| 430 | # "to make document identifiers more stable across upgrades of the software,
|
---|
| 431 | # although it means that duplicate documents contained in the collection are
|
---|
| 432 | # no longer detected automatically."
|
---|
[27629] | 433 | print STDERR "$collection - Importing:\n";
|
---|
[27621] | 434 | print $xml_fh "<import>\n";
|
---|
[27701] | 435 | &run_build_script("import.pl -removeold $collection"); #-OIDtype hash_on_full_filename
|
---|
[27621] | 436 | print $xml_fh "</import>\n";
|
---|
[27629] | 437 | print STDERR "done\n";
|
---|
[27621] | 438 |
|
---|
| 439 | #build
|
---|
[27629] | 440 | print STDERR "$collection - Building:\n";
|
---|
[27621] | 441 | print $xml_fh "<build>\n";
|
---|
[27701] | 442 | &run_build_script("buildcol.pl -removeold $collection");
|
---|
[27621] | 443 | print $xml_fh "</build>\n";
|
---|
[27629] | 444 | print STDERR "done\n";
|
---|
[27621] | 445 |
|
---|
| 446 | #rename the intermediate 'building' directory 'index'
|
---|
[27629] | 447 | print STDERR "$collection - Move \"building\" to \"index\"... ";
|
---|
[27621] | 448 | my $index = &filename_concat("collect", $collection, "index");
|
---|
| 449 | my $building = &filename_concat("collect", $collection, "building");
|
---|
| 450 | &File::Path::remove_tree($index);
|
---|
| 451 | # Renaming Directories, http://www.perlmonks.org/?node_id=177421
|
---|
| 452 | move($building, $index) or die "copy failed: $!"; # File::Copy::move
|
---|
[27629] | 453 | print STDERR "done\n";
|
---|
[27621] | 454 |
|
---|
| 455 | #diffcol
|
---|
[27629] | 456 | print STDERR "$collection - Diffing:\n";
|
---|
[27621] | 457 | my $diffcol_dir = &filename_concat($ENV{'TASK_HOME'},"diffcol");
|
---|
[27667] | 458 | $cmd = "diffcol.pl -output xml -verbosity 10 $collection"; # need to run with ./diffcol.pl if bash script
|
---|
[27621] | 459 | &run_diff_script($cmd, $xml_fh, $diffcol_dir);
|
---|
| 460 |
|
---|
| 461 | chdir($greenstone_home); # this is actually where we are
|
---|
[27629] | 462 | print STDERR "done\n";
|
---|
[27621] | 463 | print $xml_fh "</collection-test>\n";
|
---|
| 464 | }
|
---|
| 465 | closedir $collect_handle; # close handle to collect dir
|
---|
| 466 |
|
---|
| 467 | print $xml_fh "</test>\n";
|
---|
| 468 | close($xml_fh);
|
---|
| 469 |
|
---|
[27629] | 470 | print STDERR "done\n";
|
---|
[27621] | 471 | }
|
---|
| 472 |
|
---|
| 473 | ##***************************************************************
|
---|
| 474 | # runs setup in greenstone_home before running the diff command
|
---|
| 475 | sub run_diff_script {
|
---|
| 476 | my ($cmd, $fh, $diffcol_dir) = @_;
|
---|
| 477 |
|
---|
| 478 | # we're in greenstone_home now
|
---|
| 479 | if(!$isWin) {
|
---|
[27667] | 480 | $cmd = "bash -c \"export GSDLHOME=&& source $setup_script.bash && cd $diffcol_dir && ./$cmd\"";
|
---|
[27621] | 481 |
|
---|
| 482 | } else { # Need to prefix cmd -c/-k as necessary
|
---|
[27668] | 483 | $cmd = "cmd /c \"set GSDLHOME=&& $setup_script.bat && cd $diffcol_dir && perl -S $cmd\"";
|
---|
| 484 | ## print STDERR "@@@@ Going to call command: $cmd\n";
|
---|
[27621] | 485 | }
|
---|
| 486 |
|
---|
| 487 | return &run_and_print_cmd($cmd, $fh);
|
---|
| 488 | }
|
---|
| 489 |
|
---|
| 490 | # runs setup in greenstone_home before running the given build command
|
---|
| 491 | sub run_build_script {
|
---|
| 492 | my ($cmd, $fh) = @_;
|
---|
| 493 |
|
---|
| 494 | # chdir($greenstone_home);
|
---|
[27687] | 495 | # we are in $greenstone_home already, can directly run the build cmd on the collection
|
---|
[27621] | 496 | if(!$isWin) {
|
---|
| 497 | $cmd = "bash -c \"export GSDLHOME=&& source $setup_script.bash && $cmd\"";
|
---|
| 498 |
|
---|
| 499 | } else { # Need to prefix cmd -c/-k as necessary
|
---|
[27668] | 500 | $cmd = "cmd /c \"set GSDLHOME=&& $setup_script.bat && perl -S $cmd\"";
|
---|
[27621] | 501 | }
|
---|
[27687] | 502 | ## print STDERR "@@@@ Going to call command: $cmd\n";
|
---|
[27621] | 503 |
|
---|
[27668] | 504 | return system($cmd);
|
---|
[27629] | 505 | #return &run_and_print_cmd($cmd, $fh); # doesn't work on cmds chained with bash -c
|
---|
[27621] | 506 | }
|
---|
| 507 |
|
---|
| 508 |
|
---|
| 509 | # http://stackoverflow.com/questions/758611/how-to-flush-output-in-backticks-in-perl?rq=1activeperl%20sys::info
|
---|
| 510 | # http://stackoverflow.com/questions/1477500/how-do-i-get-the-output-of-an-external-command-in-perl
|
---|
| 511 | sub run_and_print_cmd {
|
---|
| 512 | my ($cmd, $fh) = @_;
|
---|
| 513 |
|
---|
| 514 | open my $pin, "$cmd|" or die "unable to run cmd $cmd: $!"; # open(my $fh, '-|', 'powercfg -l') or die $!;
|
---|
| 515 |
|
---|
| 516 | if(defined $fh) { # print cmd output both to the filehandle and to stdout
|
---|
| 517 | while (my $line = <$pin>) {
|
---|
| 518 | print $fh $line;
|
---|
| 519 | # print STDOUT $line; # if also printing cmd output to STDOUT
|
---|
| 520 | }
|
---|
| 521 | }
|
---|
| 522 | else { # no filehandle, so just need to print to stdout
|
---|
| 523 |
|
---|
| 524 | # unlike backticks operator, system() will print the output of the command to the screen as it executes
|
---|
| 525 | # http://stackoverflow.com/questions/758611/how-to-flush-output-in-backticks-in-perl?rq=1
|
---|
| 526 |
|
---|
| 527 | my $status = system $cmd;
|
---|
| 528 | if($status != 0) {
|
---|
| 529 | print STDERR "ERROR ($status) running $cmd: $!\n";
|
---|
| 530 | }
|
---|
| 531 | }
|
---|
| 532 | close($pin);
|
---|
| 533 | }
|
---|
| 534 |
|
---|
| 535 | sub filename_concat {
|
---|
| 536 | my $first_file = shift(@_);
|
---|
| 537 | my (@filenames) = @_;
|
---|
| 538 |
|
---|
| 539 | # If first_file is not null or empty, then add it back into the list
|
---|
| 540 | if (defined $first_file && $first_file =~ /\S/)
|
---|
| 541 | {
|
---|
| 542 | unshift(@filenames, $first_file);
|
---|
| 543 | }
|
---|
| 544 |
|
---|
| 545 | my $filename = join($sep, @filenames);
|
---|
| 546 | $filename =~ s/[\\\/]$//; # remove trailing slashes if any
|
---|
| 547 | return $filename;
|
---|
| 548 | }
|
---|
| 549 |
|
---|
| 550 |
|
---|
| 551 | # The following code is from
|
---|
| 552 | # http://stackoverflow.com/questions/227613/how-can-i-copy-a-directory-recursively-and-filter-filenames-in-perl
|
---|
| 553 | # It also states that "Perl's File::Copy is a bit broken (it doesn't copy permissions on Unix systems, for example)"
|
---|
| 554 | sub copy_recursively {
|
---|
| 555 | my ($from_dir, $to_dir, $regex) = @_;
|
---|
| 556 | opendir my($dh), $from_dir or die "Could not open dir '$from_dir': $!";
|
---|
| 557 |
|
---|
| 558 | # if(-d !$to_dir) {
|
---|
| 559 | # mkdir $to_dir or die "mkdir '$to_dir' failed: $!" if not -e $to_dir;
|
---|
| 560 | # }
|
---|
| 561 |
|
---|
| 562 | for my $entry (readdir $dh) {
|
---|
| 563 | next if ($entry eq "." || $entry eq "..");
|
---|
| 564 | next if (defined $regex && $entry =~ /$regex/);
|
---|
| 565 | my $source = "$from_dir/$entry";
|
---|
| 566 | my $destination = "$to_dir/$entry";
|
---|
| 567 | if (-d $source) {
|
---|
| 568 | mkdir $destination or die "mkdir '$destination' failed: $!" if not -e $destination;
|
---|
| 569 | copy_recursively($source, $destination, $regex);
|
---|
| 570 | } else {
|
---|
| 571 | copy($source, $destination) or die "copy failed: $!";
|
---|
| 572 | }
|
---|
| 573 | }
|
---|
| 574 | closedir $dh;
|
---|
| 575 | return;
|
---|
| 576 | }
|
---|
| 577 |
|
---|
| 578 | sub summarise {
|
---|
| 579 |
|
---|
| 580 | # make a summarised Xml report
|
---|
[27629] | 581 | print STDERR "Summarizing the xml report... ";
|
---|
[27621] | 582 | my $cmd = "java org.apache.xalan.xslt.Process -IN $xmlout -XSL $ENV{'TASK_HOME'}/xsl/xml-report.xsl -OUT $ENV{'DATA_DIR'}/report-$dateid.xml";
|
---|
| 583 | my $status = system($cmd);
|
---|
[27629] | 584 | print STDERR "done\n";
|
---|
[27621] | 585 |
|
---|
| 586 | # make a summarised HTMl report
|
---|
[27629] | 587 | print STDERR "Creating an html summary report... ";
|
---|
[27621] | 588 | $cmd = "java org.apache.xalan.xslt.Process -IN $ENV{'DATA_DIR'}/report-$dateid.xml -XSL $ENV{'TASK_HOME'}/xsl/html-report.xsl -OUT $ENV{'DATA_DIR'}/report-$dateid.html";
|
---|
| 589 | $status = system($cmd);
|
---|
[27629] | 590 | print STDERR "done\n";
|
---|
[27621] | 591 | }
|
---|
| 592 |
|
---|
| 593 | sub upload {
|
---|
[27657] | 594 | # if the upload dir already existed, clear it of contents
|
---|
| 595 | if (-d $ENV{'UPLOAD_DIR'}) { #else rm $UPLOAD_DIR/*
|
---|
| 596 | # don't want to keep previous days reports
|
---|
| 597 | # else we will have to manually clear them at some point
|
---|
| 598 | # just generate the set of reports for this run of task.pl upload
|
---|
| 599 | # and
|
---|
| 600 | &File::Path::remove_tree($ENV{'UPLOAD_DIR'});
|
---|
| 601 | }
|
---|
| 602 | # recreate the upload directory
|
---|
| 603 | &File::Path::make_path($ENV{'UPLOAD_DIR'});
|
---|
[27621] | 604 |
|
---|
| 605 | # copy all *.xml and *.html files across to UPLOAD_DIR
|
---|
| 606 | opendir my($dh), $ENV{'DATA_DIR'} or die "Could not open DATA_DIR: $!";
|
---|
| 607 | for my $entry (readdir $dh) {
|
---|
[27687] | 608 | next if ($entry !~ m/(\.xml|\.html?)$/);
|
---|
| 609 |
|
---|
| 610 | # copy the reports across with different names: with OS prefixed to them. And for the HTML file on Win, rename to HTM
|
---|
| 611 | # html files uploaded from windows to nzdl are empty for no reason. Uploading as htm seems to work
|
---|
[27694] | 612 | my $os_entry = $entry;
|
---|
| 613 | $os_entry =~ s@\[email protected]@ if $isWin;
|
---|
[27702] | 614 | $os_entry = $^O."-diffcol-$os_entry";
|
---|
[27687] | 615 |
|
---|
| 616 | # get the absolute path to the original files before copying them over
|
---|
| 617 | $entry = &filename_concat($ENV{'DATA_DIR'}, $entry);
|
---|
| 618 |
|
---|
| 619 | # copy them over with their new names
|
---|
| 620 | ## print STDERR "@@@@ copying across $entry to $ENV{'UPLOAD_DIR'} as $os_entry\n";
|
---|
| 621 | copy($entry, "$ENV{'UPLOAD_DIR'}$sep$os_entry"); #copy($entry, "$ENV{'UPLOAD_DIR'}");
|
---|
[27621] | 622 | }
|
---|
| 623 | closedir $dh;
|
---|
| 624 |
|
---|
[27637] | 625 |
|
---|
| 626 | # Upload the html file to puka
|
---|
| 627 | #default identity dir
|
---|
| 628 | if ( ! exists $ENV{'IDENTITY_DIR'} ) {
|
---|
| 629 | $ENV{'IDENTITY_DIR'} = "$ENV{'HOME'}${sep}.ssh";
|
---|
| 630 | }
|
---|
| 631 | if (! exists $ENV{'SNAPSHOT_MODE'} ) {
|
---|
| 632 | $ENV{'SNAPSHOT_MODE'} = "caveat";
|
---|
| 633 | }
|
---|
| 634 |
|
---|
[27678] | 635 | #use the correct key for uploading
|
---|
[27637] | 636 | $ENV{'IDENTITY_FILE'} = "$ENV{'IDENTITY_DIR'}${sep}upload-" . $ENV{'SNAPSHOT_MODE'} . ($^O eq "MSWin32" ? ".ppk" : "");
|
---|
| 637 | if(-f $ENV{'IDENTITY_FILE'}) {
|
---|
[27678] | 638 | # if you need to touch the file on windows: http://stackoverflow.com/questions/51435/windows-version-of-the-unix-touch-command
|
---|
| 639 |
|
---|
[27694] | 640 | # the report we want to upload is actually just os-diffcol-report-$dateid.html
|
---|
[27687] | 641 | my $command = "cd \"$ENV{'UPLOAD_DIR'}\" && tar -c *.htm* | "; #&& cat *.html | "; # && tar -c * |
|
---|
[27637] | 642 | $command .= ($^O eq "MSWin32" ? "plink" : "ssh");
|
---|
| 643 | $command .= " -T -i \"$ENV{'IDENTITY_FILE'}\" nzdl\@puka.cs.waikato.ac.nz";
|
---|
| 644 | #print "$command\n";
|
---|
| 645 | my $status = system("$command");
|
---|
| 646 | if($status != 0) {
|
---|
[27678] | 647 | print STDERR "*** Failed to upload test report to nzdl $status\n";
|
---|
[27637] | 648 | }
|
---|
| 649 | } else {
|
---|
| 650 | print STDERR "*** Cannot upload the test report to nzdl from this machine\n";
|
---|
| 651 | }
|
---|
| 652 |
|
---|
[27629] | 653 | print STDERR "Finished uploading\n";
|
---|
[27621] | 654 | }
|
---|
| 655 |
|
---|
| 656 | # Sending emails with perl: http://learn.perl.org/examples/email.html
|
---|
| 657 | # Sending email attachments with perl: http://www.perlmonks.org/?node_id=19430
|
---|
[27628] | 658 | # Sadly none of the packages are installed by default and use of MIME::Lite is discouraged
|
---|
| 659 | sub mail_with_report_attached
|
---|
| 660 | {
|
---|
| 661 | # email out with report attached, if the tests failed
|
---|
[27629] | 662 | print STDERR "Checking if successful... \n";
|
---|
[27628] | 663 | my $cmd = "java org.apache.xalan.xslt.Process -IN $xmlout -XSL $ENV{'TASK_HOME'}/xsl/passed-or-not.xsl";
|
---|
| 664 | #my $result = system($cmd);
|
---|
| 665 | my $result = `$cmd`;
|
---|
[27621] | 666 |
|
---|
[27629] | 667 | print STDERR "result: $result\n";
|
---|
[27621] | 668 |
|
---|
[27628] | 669 | if($result ne "yes") {
|
---|
| 670 | my $msg = "$gsdl regression test for $dateid failed";
|
---|
| 671 | my $subject = "Regression Test Failed"; #"$gsdl regression test for $dateid failed\n";
|
---|
| 672 | my $attach_file = &filename_concat($ENV{'DATA_DIR'}, "report-$dateid.html");
|
---|
| 673 |
|
---|
[27687] | 674 | if($isWin) {
|
---|
| 675 | if($use_blat && $blat && $ENV{'GSDL_SMTP'}) {
|
---|
[27678] | 676 | # http://stackoverflow.com/questions/709635/sending-mail-from-batch-file
|
---|
| 677 | #blat -to [email protected] -server smtp.example.com -f [email protected] -subject "subject" -body "body"
|
---|
[27628] | 678 |
|
---|
[27678] | 679 | # need to install blat on windows
|
---|
| 680 | $cmd = "$blat -to $ENV{'MONITOR_EMAIL'} -server $ENV{'GSDL_SMTP'} -f $ENV{'MONITOR_EMAIL'} -attach $attach_file -subject \"$subject\" -body \"$msg\"";
|
---|
| 681 | $result = system($cmd);
|
---|
| 682 | }
|
---|
| 683 | else {
|
---|
[27687] | 684 | $result = 1; # status from running mail command is 0 if success, 1 if fail
|
---|
[27678] | 685 | print STDERR "********************************************\n";
|
---|
[27687] | 686 | if ($use_blat) {
|
---|
| 687 | print STDERR "Need blat and SMTP set to send mail attachment\n" ;
|
---|
| 688 | } else {
|
---|
| 689 | print STDERR "Not set up to send mail on Windows\n";
|
---|
| 690 | }
|
---|
[27678] | 691 | print STDERR "Inspect report at: $attach_file\n";
|
---|
| 692 | print STDERR "********************************************\n";
|
---|
| 693 | }
|
---|
| 694 | } else { # linux
|
---|
[27628] | 695 | my $status = system("command -v mutt > /dev/null 2>&1;"); #better way of doing "which mutt"
|
---|
| 696 |
|
---|
| 697 | if($status != 0) { # mutt doesn't exist, can't send attachments, so send simple email
|
---|
| 698 | $cmd="echo '$gsdl regression test for $dateid failed.' | mail -s 'Regression Test Failed' $ENV{'MONITOR_EMAIL'}";
|
---|
| 699 |
|
---|
| 700 | print STDERR "********************************************\n";
|
---|
| 701 | print STDERR "No mutt installed, unable to mail attachment\n";
|
---|
| 702 | print STDERR "Inspect report at: $attach_file\n";
|
---|
| 703 | print STDERR "********************************************\n";
|
---|
| 704 | } else {
|
---|
| 705 | #$cmd = "bash -c \"echo '$gsdl regression test for $dateid failed' | mutt -a $attach_file -s 'Regression Test Failed' -- $ENV{'MONITOR_EMAIL'}\"";
|
---|
| 706 | $cmd = "echo '$gsdl regression test for $dateid failed' | mutt -a $attach_file -s 'Regression Test Failed' -- $ENV{'MONITOR_EMAIL'}";
|
---|
| 707 | }
|
---|
[27678] | 708 |
|
---|
| 709 | # run the mail command
|
---|
| 710 | $result = system($cmd); #&run_and_print_cmd($cmd);
|
---|
[27628] | 711 | }
|
---|
| 712 |
|
---|
[27678] | 713 |
|
---|
[27637] | 714 | if($result != 0) {
|
---|
| 715 | print STDERR "*** Unable to send email: $?\n";
|
---|
| 716 | }
|
---|
| 717 | else {
|
---|
| 718 | print STDERR "Sent mail with report attached.\n";
|
---|
| 719 | }
|
---|
[27628] | 720 | } else {
|
---|
| 721 | print STDERR "********************************************\n";
|
---|
[27629] | 722 | print STDERR "Tests were successful. Not sending mail.\n";
|
---|
[27628] | 723 | print STDERR "********************************************\n";
|
---|
| 724 | }
|
---|
| 725 | }
|
---|
| 726 |
|
---|
[27621] | 727 | # The old version of this program contained the following, consisting of 1 line of active code:
|
---|
| 728 |
|
---|
| 729 | # Invoke as: sjmc@br:/research/sjm84/envi/bin$ ./envi diffcol summarise
|
---|
| 730 | # Doing so will call this pl file and pass in "summarise" in ARGV
|
---|
| 731 | # This pl file will in turn call the task executable in this folder
|
---|
| 732 | # passing in "summarise" as a parameter.
|
---|
| 733 | #system("/bin/bash -c \"../etc/tasks/diffcol/task @ARGV\"");
|
---|
| 734 |
|
---|
| 735 | ##system("/bin/bash -c \"./task @ARGV\"");
|
---|
| 736 | ##print STDERR "/bin/bash -c ../etc/tasks/diffcol/task @ARGV"
|
---|
[27694] | 737 |
|
---|